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Protein Overview: ODPA1_ARATH

General Information:
Name(s) found: ODPA1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|5080822|gb|AAD39331.1|AC007258_20 pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|27735220|sp|P52901.2|ODPA1_ARATH RecName: Full=Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial; Short=PDHE1-A; Flags: Precursor [NCBI NR]
  • pir||B96623 pyruvate dehydrogenase E1 alpha subunit [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|24030439|gb|AAN41374.1| putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|21593256|gb|AAM65205.1| pyruvate dehydrogenase e1 alpha subunit, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|15218940|ref|NP_176198.1| AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] [NCBI NR]
  • (P52901) Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor (EC 1.2.4.1) (PDHE1-A) [Swiss-Prot]
  • Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=E1 ALPHA PE=2 SV=2 [Swiss-Prot]
  • pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana]gi|24030439|gb|AAN41374.1| putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis thaliana]gi|21593256|gb|AAM65205.1| pyruvate dehydrogenase e1 alpha subunit, putative [Arabidopsis tha [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Pyruvate dehydrogenase E1 component alpha subunit, mitochondrial precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: AT-E1 ALPHA | AT-E1 ALPHA (pyruvate dehydrogenase complex E1 alpha subunit); pyruvate dehydrogenase (acetyl-transferring) | chr1:22055033-22057325 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pyruvate dehydrogenase E1 alpha subunit [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • pyruvate dehydrogenase e1 alpha subunit, putative [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial precursor (PDHE1-A) [nr-271106-contam.fasta]
  • putative pyruvate dehydrogenase e1 alpha subunit [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: AT-E1 ALPHA, E1 ALPHA | pyruvate dehydrogenase complex E1 alpha subunit | chr1:22051368-22053660 FORWARD LENGTH=389 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    mitochondrion [IDA]
    cytosol [IDA]
    Biological Process: metabolic process [ISS]
    response to cadmium ion [IDA][IEP]
    Molecular Function: oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [IEA]
    pyruvate dehydrogenase (acetyl-transferring) activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSRLSSRS NIITRPFSAA FSRLISTDTT PITIETSLPF TAHLCDPPSR SVESSSQELL  60
   61 DFFRTMALMR RMEIAADSLY KAKLIRGFCH LYDGQEAVAI GMEAAITKKD AIITAYRDHC 120
  121 IFLGRGGSLH EVFSELMGRQ AGCSKGKGGS MHFYKKESSF YGGHGIVGAQ VPLGCGIAFA 180
  181 QKYNKEEAVT FALYGDGAAN QGQLFEALNI SALWDLPAIL VCENNHYGMG TAEWRAAKSP 240
  241 SYYKRGDYVP GLKVDGMDAF AVKQACKFAK QHALEKGPII LEMDTYRYHG HSMSDPGSTY 300
  301 RTRDEISGVR QERDPIERIK KLVLSHDLAT EKELKDMEKE IRKEVDDAIA KAKDCPMPEP 360
  361 SELFTNVYVK GFGTESFGPD RKEVKASLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..389] PSI-BLAST 89.0 E1-beta subunit of pyruvate dehydrogenase (PP module)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • pyruvate dehydrogenase activity
    		•  11.3856674722026 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
    		•  11.0549577473177 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  10.8180381281695 bayes_pls_golite062009
  • 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
    		•  7.00951713446616 bayes_pls_golite062009
  • alpha-ketoacid dehydrogenase activity
    		•  6.25236550086321 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  4.89064211833637 bayes_pls_golite062009
  • acetolactate synthase activity
    		•  4.51986503762195 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  3.8269109174531 bayes_pls_golite062009
  • 2-oxoisovalerate dehydrogenase (acylating) activity
    		•  3.00128844859152 bayes_pls_golite062009
  • cyclin-dependent protein kinase 5 activator regulator activity
    		•  3.00128844859152 bayes_pls_golite062009
  • catalytic activity
    		•  2.25537597692103 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.85833680148029 bayes_pls_golite062009
  • transketolase activity
    		•  1.53492491341322 bayes_pls_golite062009
  • protein binding
    		•  0.992849906276347 bayes_pls_golite062009
  • binding
    		•  0.750068469698571 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  0.667418924427388 bayes_pls_golite062009
  • pyruvate decarboxylase activity
    		•  0.198062360371269 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.77

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle