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Protein Overview: MSI1_ARATH

General Information:
Name(s) found: MSI1_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Histone-binding protein MSI1 OS=Arabidopsis thaliana GN=MSI1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    chloroplast [IDA]
    chromatin remodeling complex [IPI]
    CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: chromatin modification [IMP]
    cell proliferation [IMP]
    multicellular organismal development [IMP]
    embryonic development ending in seed dormancy [IMP]
    pollen development [IGI][IMP]
    seed development [IMP]
    positive regulation of cell cycle [IGI]
    regulation of gene expression by genetic imprinting [IPI]
    regulation of flower development [IMP]
    heterochromatin formation [IMP]
    leaf development [IMP]
    seed coat development [IMP]
    trichome differentiation [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKDEEEMRG EIEERLINEE YKIWKKNTPF LYDLVITHAL EWPSLTVEWL PDREEPSGKD  60
   61 YSVQKMILGT HTSESEPNYL MLAQVQLPLD DTESEARQYD DDRSEFGGFG CATGKVQIIQ 120
  121 QINHDGEVNR ARYMPQNPFI IATKTVNAEV YVFDYSKHPS KPPLDGACNP DLKLRGHSSE 180
  181 GYGLSWSKFK QGHLLSGSDD AQICLWDINA TPKNKSLDAQ QIFKAHEGVV EDVAWHLRHE 240
  241 YLFGSVGDDQ YLLIWDLRSP SASKPVQSVV AHSMEVNCLA FNPFNEWVVA TGSTDKTVKL 300
  301 FDLRKLSTAL HTFDSHKEEV FQVGWNPKNE TILASCCLGR RLMVWDLSRI DEEQTVEDAE 360
  361 DGPPELLFIH GGHTSKISDF SWNPCEDWVI SSVAEDNILQ IWQMAENIYH DEDDAPGEEP 420
  421 SKAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] PSI-BLAST 47.0 Tup1, C-terminal domain
    2 View Details [75..424] PSI-BLAST 51.69897 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle