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Protein Overview: EIF3K_ARATH

General Information:
Name(s) found: EIF3K_ARATH [Swiss-Prot]
Description(s) found:
Found 23 descriptions.
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  • Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana GN=TIF3K1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 226 amino acids

    Gene Ontology:
    Cellular Component: eukaryotic translation initiation factor 3 complex [ISS]
    Biological Process: regulation of translational initiation [IEA]
    translational initiation [IEA]
    Molecular Function: translation initiation factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVEIQSPQE QSSYTVEQLV ALNPFNPEIL PDLENYVNVT SQTYSLEVNL CLLRLYQFEP  60
   61 ERMNTHIVAR ILVKALMAMP TPDFSLCLFL IPERVQMEEQ FKSLIVLSHY LETGRFQQFW 120
  121 DEAAKNRHIL EAVPGFEQAI QAYASHLLSL SYQKVPRSVL AEAVNMDGAS LDKFIEQQVT 180
  181 NSGWIVEKEG GSIVLPQNEF NHPELKKNTG ENVPLEHIAR IFPILG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] PSI-BLAST 93.30103 Crystal Structure of Human eIF3k

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  4.65136805471804 bayes_pls_golite062009
  • binding
    		•  2.91891696274037 bayes_pls_golite062009
  • protein binding
    		•  1.94427330399472 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.8401324043677 bayes_pls_golite062009
  • RNA cap binding
    		•  1.73309326409609 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.72695422276859 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.54960543048317 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.0361110104194 bayes_pls_golite062009
  • structural molecule activity
    		•  0.908029258648777 bayes_pls_golite062009
  • translation regulator activity
    		•  0.82193201542158 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.821718728559452 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.803700928110921 bayes_pls_golite062009
  • DNA binding
    		•  0.797151158461249 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.742648546865457 bayes_pls_golite062009
  • RNA binding
    		•  0.40024158562931 bayes_pls_golite062009
  • transcription factor activity
    		•  0.123371336741999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle