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Protein Overview: CP20C_ARATH

General Information:
Name(s) found: CP20C_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 260 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    thylakoid lumen [IDA]
    cytosolic ribosome [IDA]
    apoplast [IDA]
    chloroplast envelope [IDA]
    chloroplast thylakoid membrane [IDA]
    thylakoid [IDA]
    Biological Process: response to oxidative stress [IMP]
    response to abscisic acid stimulus [IEP]
    response to salt stress [IMP]
    signal transduction [ISS]
    cysteine biosynthetic process [IMP]
    response to mannitol stimulus [IMP]
    response to light intensity [IMP]
    [NOT]protein targeting to chloroplast [IDA]
    protein folding [ISS]
    defense response to bacterium [IEP]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSMQMV HTSRSIAQIG FGVKSQLVSA NRTTQSVCFG ARSSGIALSS RLHYASPIKQ  60
   61 FSGVYATTKH QRTACVKSMA AEEEEVIEPQ AKVTNKVYFD VEIGGEVAGR IVMGLFGEVV 120
  121 PKTVENFRAL CTGEKKYGYK GSSFHRIIKD FMIQGGDFTE GNGTGGISIY GAKFEDENFT 180
  181 LKHTGPGILS MANAGPNTNG SQFFICTVKT SWLDNKHVVF GQVIEGMKLV RTLESQETRA 240
  241 FDVPKKGCRI YACGELPLDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [92..260] PSI-BLAST 71.69897 Cyclophilin (eukaryotic)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle