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Protein Overview: COBL7_ARATH

General Information:
Name(s) found: COBL7_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||E71427 hypothetical protein - Arabidopsis thaliana [NCBI NR]
  • gi|7268361|emb|CAB78654.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|34222586|sp|Q8GZ17.2|COBL7_ARATH RecName: Full=COBRA-like protein 7; Flags: Precursor [NCBI NR]
  • gi|2326365|emb|CAA74765.1| putative cell wall protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2244970|emb|CAB10391.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18414592|ref|NP_567484.1| COBL7 (COBRA-LIKE 7) [Arabidopsis thaliana] [NCBI NR]
  • COBRA-like protein 7 OS=Arabidopsis thaliana GN=COBL7 PE=1 SV=2 [Swiss-Prot]
  • (Q8GZ17) COBRA-like protein 7 precursor [Swiss-Prot]
  • hypothetical protein [Arabidopsis thaliana]gi|2244970|emb|CAB10391.1| hypothetical protein [Arabidopsis thaliana]gi|2326365|emb|CAA74765.1| putative cell wall protein [Arabidopsis thaliana]gi|34222586|sp|Q8GZ17|CBL7_ARATH COBRA-like protein 7 precursor [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 COBRA-like protein 7 precursor [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: COBL7, ATSEB1 | ATSEB1 | chr4:9116602-9119149 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • COBRA-like protein 7 precursor [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative cell wall protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATSEB1 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATSEB1, COBL7, SEB1 | COBRA-like protein-7 precursor | chr4:9116591-9119138 REVERSE LENGTH=661 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 661 amino acids

    Gene Ontology:
    Cellular Component: [NOT]endoplasmic reticulum [ISS]
    Golgi apparatus [IDA]
    anchored to plasma membrane [IDA]
    anchored to membrane [TAS]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAPNFIPR LLLLSLLIVS IPLTSSQSDA NTTNPSPSPP SDSDLCNGVF VSYTHTKGSK  60
   61 IPPNDTANQP YRFESVITVL NHGRDELKSW RVFVKFAHRE ILVSASNAVL SDGSSLPVSV 120
  121 ENGTVFAGYP SSDLKSAIQT AGDVTQMQAR VELVGTQFGV APPNVPLPKN ITLATDGWKC 180
  181 PKATQKGTNV LQVCCIPDPD YDNREIIDNE FLPRKDGDLT IMYDVVRSYS SNYMAQVTME 240
  241 NHNPLGRLDN WKLSFDWMRD EFIYTMKGAY PSIVDSSDCV DGPQAKHYQD LDFSNVLSCA 300
  301 RRPTVIDLPP TKYNDSTFGL IPFCCRNGTI LPRSMDPSKS SSVFQMQVYK MPPDLNISAL 360
  361 SPPQNWRING TLNPDYKCGP PVRVSPSQFV DPSGLPSNRT AFASWQVVCN ITQPKDASPR 420
  421 CCVSFSAYFN DSIVPCKTCA CGCSSNKAAR ACSATAPSLL LPQQALLVPF ENRTELTVAW 480
  481 AYLKQRPVPN PMPCGDNCGV SINWHLATDY RGGWTARVTV FNWGETDFVD WFTAVQMKNA 540
  541 APGFEKAYSF NASTIGINGK NNTIFMEGLP GLNYLVAERD GENPLKNPRI PGKQQSVMSF 600
  601 TKKLTPGINV PGGDGFPSKV FFNGEECSLP TILPMRSSQH RKHISVFLLA LPVLALLILR 660
  661 A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] deduced N/A No confident structure predictions are available.
    2 View Details [209..443] Pfam 141.455932 No description for PF04833.6 was found. No confident structure predictions are available.
    3 View Details [444..528] deduced N/A No confident structure predictions are available.
    4 View Details [529..661] MSA 2.021957 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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