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Protein Overview: MAP1A_ARATH

General Information:
Name(s) found: MAP1A_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Methionine aminopeptidase 1A OS=Arabidopsis thaliana GN=MAP1A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 398 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    Biological Process: N-terminal protein amino acid modification [TAS]
    protein processing [NAS]
    Molecular Function: metalloexopeptidase activity [IEA]
    aminopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASESDASSI ATLSCARCEK PAHLQCPKCI DLKLPREQAS FCTQECFKAA WSSHKSVHVK  60
   61 AQLSSIGDQN SDLISQGWLY CVKKGQARTP KLPHFDWTGP LKQYPISTKR VVPAEIEKPD 120
  121 WAIDGTPKVE PNSDLQHVVE IKTPEQIQRM RETCKIAREV LDAAARVIHP GVTTDEIDRV 180
  181 VHEATIAAGG YPSPLNYYFF PKSCCTSVNE VICHGIPDAR KLEDGDIVNV DVTVCYKGCH 240
  241 GDLNETYFVG NVDEASRQLV KCTYECLEKA IAIVKPGVRF REIGEIVNRH ATMSGLSVVR 300
  301 SYCGHGIGDL FHCAPNIPHY ARNKAVGVMK AGQTFTIEPM INAGGWRDRT WPDGWTAVTA 360
  361 DGKRSAQFEH TLLVTETGVE VLTARLPSSP DVYPWLTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] FFAS03 2.36 No description for 2d8qA was found.
    2 View Details [68..398] PSI-BLAST 82.39794 Crystal structure of Human Methionine Aminopeptidase Type I with a third cobalt in the active site

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.07856148407289 bayes_pls_golite062009
  • binding
    		•  2.04387193075129 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.87234530699157 bayes_pls_golite062009
  • DNA binding
    		•  1.80010397318845 bayes_pls_golite062009
  • protein binding
    		•  0.520486355666439 bayes_pls_golite062009
  • transcription activator activity
    		•  0.433279783515038 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.231467468018183 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle