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Protein Overview: PINI_ARATH

General Information:
Name(s) found: PINI_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Auxin efflux carrier component 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 622 amino acids

    Gene Ontology:
    Cellular Component: basal plasma membrane [IDA]
    apical part of cell [IDA]
    cytoplasm [IDA]
    membrane [ISS]
    plasma membrane [IDA]
    Biological Process: embryonic development [IMP]
    root development [IMP]
    auxin polar transport [IMP]
    photomorphogenesis [TAS]
    flower development [IMP]
    inflorescence development [IMP]
    shoot development [IMP]
    xylem and phloem pattern formation [IMP]
    leaf shaping [IMP]
    leaf formation [IGI]
    gravitropism [IMP]
    cotyledon morphogenesis [IMP]
    Molecular Function: transporter activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA  60
   61 ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW TITLFSLSTL PNTLVMGIPL 120
  121 LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD 180
  181 IMSLDGRQPL ETEAEIKEDG KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS 240
  241 LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK 300
  301 PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ 360
  361 DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND HQKDVKISVP QGNSNDNQYV 420
  421 EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY 480
  481 SSLFGITWSL ISFKWNIEMP ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA 540
  541 AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST 600
  601 AVIFGMLIAL PITLLYYILL GL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] Pfam 8.207608 No description for PF03547.9 was found. No confident structure predictions are available.
    2 View Details [165..373] FFAS03 0.953 No description for 2j0qI was found.
    3 View Details [374..494] deduced N/A No confident structure predictions are available.
    4 View Details [495..622] MSA 200.572997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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