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Protein Overview: CE36021

General Information:
Name(s) found: CE36021 [WormBase]
Description(s) found:
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  • WBGene00020797 status:Confirmed UniProt:Q965I8 protein_id:CCD72840.1 [WormBase]
  • gi|71996324|ref|NP_493671.2| hypothetical protein T25D3.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|38176051|gb|AAK84579.2|AF077539_2 Hypothetical protein T25D3.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep115.fasta]
  • Hypothetical protein T25D3.3 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36021 WBGene00020797 serine\/threonine dehydratase status:Partially_confirmed TR:Q965I8 protein_id:AAK84579.2 [wormpep150.fasta]
  • 36021 WBGene00020797 serine\/threonine dehydratase status:Partially_confirmed TR:Q965I8 protein_id:AAK84579.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • serine\/threonine dehydratase status:Partially_confirmed TN:AAK84579 protein_id:AAK84579.2 [wormpep115.fasta.reversed]
  • CE36021 WBGene00020797 serine\/threonine dehydratase status:Partially_confirmed UniProt:Q965I8_CAEEL protein_id:AAK84579.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36021 WBGene00020797 serine\/threonine dehydratase status:Partially_confirmed UniProt:Q965I8_CAEEL protein_id:AAK84579.2| [wormORF-contam.fasta]
  • T25D3.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36021 WBGene00020797 serine\/threonine dehydratase status:Partially_confirmed UniProt:Q965I8 protein_id:AAK84579.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36021 WBGene00020797 serine\/threonine dehydratase status:Confirmed UniProt:Q965I8 protein_id:CCD72840.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE36021 WBGene00020797 status:Confirmed UniProt:Q965I8 protein_id:CCD72840.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T25D3.3 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 427 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: metabolic process [IEALink to PubMed article]
    proteolysis [IEALink to PubMed article]
    cysteine biosynthetic process via cystathionine [IEALink to PubMed article]
    cysteine biosynthetic process from serine [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    cystathionine beta-synthase activity [IEALink to PubMed article]
    cysteine synthase activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISDYFYLLF TISLLANSAL MVVTHQSSNG NRISDAPKDQ MTESKEWTRD AIQKMWSERN  60
   61 LMGSTPIHVI DPPGLPSVRL VFKNESASLT GSLKHRYSWS LMMWALLEGH VKNGTHVFEA 120
  121 SSGNTACSLG YMCRLLGLQF TAVVPDTIEQ VKVRRIEEQE GFVVRVPISD RLIIAEQLAK 180
  181 STGGFFMNQF KNAFHAEEFH ESGSASSKPS ANLMHELFHQ LNSTPPSIFV HPAGTGGTLS 240
  241 SIGRYAKKYG LDTEIVLADT QYSIYYDYVL NGTFSKNTGA HHWVAPGMAG IGYGAMGPAQ 300
  301 IAETTSLDPA VIDRVLKIPD LASTAAMKVA RDVGINGGTS TGVNFLAALH IGALIRAQNP 360
  361 KNQEIFTIAT ILADSGKYYE TTYFNRKWIS EKFKTHGGLP VYDCWLQVIQ DCWISGKDPL 420
  421 DIGRKMC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..427] PSI-BLAST 85.69897 Cystathionine beta-synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cysteine synthase activity
    		•  5.41656208810337 bayes_pls_golite062009
  • catalytic activity
    		•  2.76038225023173 bayes_pls_golite062009
  • lyase activity
    		•  2.54165185299539 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.52790731142158 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  1.20598297230192 bayes_pls_golite062009
  • cystathionine beta-synthase activity
    		•  0.990559595514791 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.943946746392831 bayes_pls_golite062009
  • threonine synthase activity
    		•  0.86525519885835 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.8463142805916 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  0.57533596285038 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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