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Protein Overview: ret-1

General Information:
Name(s) found: ret-1 / CE35914 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00004336 locus:ret-1 Reticulon-like protein status:Confirmed UniProt:Q7JLB0 protein_id:CAE48546.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 204 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum [IEALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: cell adhesion [IEALink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSCQCQKVL DVIYWRDAKK SAIVLSLALL VLFVLAKYPL LTVVTYSLLL ALGAAAGFRV  60
   61 FKKVEAQIKK TDSEHPFSEI LAQDLTLPQE KVHAQADVFV EHATCIANKL KKLVFVESPL 120
  121 ESIKFGLVLW SLTYIASWFS GFTLAILGLL GVFSVPKVYE SNQEAIDPHL ATISGHLKNV 180
  181 QNIIDEKLPF LRSAPVAAEE KKDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 14.045757 No description for 2g31A was found.
    2 View Details [118..204] MSA 7.117997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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