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Protein Overview: nas-20

General Information:
Name(s) found: nas-20 / CE35907 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00003539 locus:nas-20 Zinc metalloproteinase nas-20 status:Confirmed UniProt:Q22396 protein_id:CAA98528.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    astacin activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITVNFLLV ALIGVPSVLS DRHITRDKRQ AMRDYAKWEN NKMSLFFYNL PLEMQAMFRD  60
   61 AINYLENHTC LKFEYNENAE TAVRIRKGNG CYSLYGMHAG EVQDLTLDYN CASFGTAVHE 120
  121 IMHALGIAHG QARSDRDDYL IVDSTNSNDG IENTENLVPF DYGSVMLYAR DPHSDKRIPI 180
  181 DPEYNFTMGS LRVAFYDMVL LNKFYGCNCD NHPRKLDCKN GGYQNPANCE ECLCTDGFNG 240
  241 QLCDQHEGVY VLEAKKEWDA SGVRNNYRKG IETNTMPEYT YFALTAPEGS TIEVRITKLS 300
  301 GFFCQHTCDY NGVELKYKTD RRIVSPLVCC DNDNLWNKTR SSTNNPFIIA KYGNNRTPHF 360
  361 EFEYRYIPGN ATAAPEENN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..260] PSI-BLAST 29.522879 STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES
    2 View Details [261..379] PSI-BLAST 12.09691 Complement C1S component

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.361128926739778 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29183147920977 bayes_pls_golite062009
  • peptidase activity
    		•  0.23695590197447 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0341081586881899 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle