Protein Overview: lfi-1

General Information:
Name(s) found:	lfi-1 / CE35814 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00022500 locus:lfi-1 status:Partially_confirmed UniProt:H2L0I3 protein_id:CCD73131.1 [WormBase] gi\|72003683\|ref\|NP_001024981.1\| Lin-5 (Five) Interacting protein family member (lfi-1) [Caenorhabditis elegans] [NCBI NR] gi\|37515173\|gb\|AAQ91890.1\| Lin-5 (five) interacting protein protein 1, isoform d [Caenorhabditis elegans] [NCBI NR] [wormpep111.fasta] Lin-5 (five) interacting protein protein 1, isoform d [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] CE35814 WBGene00022500 locus:lfi-1 status:Partially_confirmed TR:Q7JNN3 protein_id:AAQ91890.1 [wormpep150.fasta] 35814 WBGene00022500 locus:lfi-1 status:Partially_confirmed TR:Q7JNN3 protein_id:AAQ91890.1 [wormpep130-phg-ecoli-orf-rand.fasta] status:Partially_confirmed TN:AAQ91890 protein_id:AAQ91890.1 [wormpep115.fasta.reversed] CE35814 WBGene00022500 locus:lfi-1 status:Partially_confirmed UniProt:Q7JNN3_CAEEL protein_id:AAQ91890.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE35814 WBGene00022500 locus:lfi-1 status:Partially_confirmed UniProt:Q7JNN3_CAEEL protein_id:AAQ91890.1\| [wormORF-contam.fasta] Lin-5 (Five) Interacting protein family member (lfi-1) [Caenorhabditis elegans] [nr-271106-contam.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE35814 WBGene00022500 locus:lfi-1 status:Partially_confirmed UniProt:Q7JNN3 protein_id:AAQ91890.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] CE35814 WBGene00022500 locus:lfi-1 status:Partially_confirmed UniProt:H2L0I3 protein_id:CCD73131.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] Isoform of H2L0I2, Lin-5 (Five) Interacting protein OS=Caenorhabditis elegans GN=lfi-1 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	2350 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA][IEA] kinetochore microtubule [IDA] proteinaceous extracellular matrix [IEA]
Biological Process:	viral reproduction [IEA] regulation of transcription, DNA-dependent [IEA] cell adhesion [IEA] blood coagulation [IEA]
Molecular Function:	transcription factor activity [IEA] sequence-specific DNA binding [IEA] protein dimerization activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTHDDTRSS GGGDGTIHIP SADAKEPTPE SPGSRSNYGE FYCPTTDSLK TYSYTIHMKK  60
   61 SEEEIHDFDM GSWDEYSRDT SGENNYHHTS SFDDDLLLEI DSSRGAAVAR LDRTQDDLNK 120
  121 FRQRIDNNVE QQREYSEMMA ALQNKVHEYR KHIAELEGRM VGARNRMLDD PTSNVMIFDN 180
  181 YDPGNTYITN HNVELWSPAR GKRETILGGG GAPGLTTVNV HAGAGYSGSG VAGYGGGVQA 240
  241 MVGDPNANYE MIARLDEERR RSDEYRMQWE NERQKSLSLE DENDRLRREF ERYANDSKDK 300
  301 EKTFINRERN LAQYLSDEQR KMLDLWTELQ RVRKQFSDLK THTEEDLDKQ KAEFTRAIRN 360
  361 VNNISRNAAF SAGAGDGLGL YGLEDGGDVN RTTNNYEKVF IETIKRMNGT GGAGSASSAD 420
  421 LLEELRKIRG GGSSEGDAEL HKELMTKYEE SIERNIELES RGDDSQRKIA ELEAELRRNR 480
  481 EKLNEAQGAL KKLHEMAQDS EKNVDGTVSI KRTRSLSPGK TPLPPSEALR AVRNTFRNKD 540
  541 NDIQQLERKL KIAESQVKEF LNKFENADEA RRRLDKQFAD AKREISNLQK SVDEAERNSR 600
  601 RTDDKLRASE AERVAAEKAR KFLEDELAKL QASFQKSSTD DARKLRDEMD EHTNSIQEEF 660
  661 KTRIDELNRR VENLLRENNR LKSEVNPLKD KYRDLENEYN STQRRIEEKE TQIRYSDDIR 720
  721 RNIQKDLDDL REKYDRVHTD NEKILGELEH AQKAAHLAEQ QLKEIKIQRD DYQKQKDEHA 780
  781 RHLFDIRHKL ETEIKGRQDL EKNGARNNDE LDKLRQTISD YESQINLLRR HNDELDTTIK 840
  841 GHQGKITHLE NELHSRSGEI EKLNDLNQRL QKEKQDILNQ KLKLDGDVQA LKETIRKLEN 900
  901 ELEKLRNENK ELVGKEARAR DAANQQLSRA NLLNKELEDT KQDLKHSTDV NKQLEQDIRD 960
  961 LKERLANIGK GGRISRDSTT GTDGGAFGDR SSVADPSRTR GAAGSTVFVP AAEDIESRGG1020
 1021 GEIDIPSSGD VIHGRDGRDG RDAGNRGTHT ITNTKERIER IEKNILDRYH DDELVEHKIR1080
 1081 EVNDRWKREL ERLENEKDDL ERRIRELEDE LSQIGRGNDK TENDITELKR KHAAEIDKLK1140
 1141 SDISALHDKH LSDLDDEKEQ YGKAVENLKS VEDDLRDKLN NLEKQLADSL NRENELEREK1200
 1201 RDYDEKINSL YGQNQKIKDE WDDFRNDADK EIQKWKTDAY TVRSEAKALE TTNTALKAQL1260
 1261 QAANDRIDHL TKTVNDHTSK VRDLTSQVRH LEDELADTKG NLVQKEMDLE STQNRLRSLE1320
 1321 DQHSTLQSDA NKWRGELDAA LRENDILKSN NTNMETDLTR LKNRLKSAED ALKELKNSLS1380
 1381 HAKTEKERLQ NAFREKTKQA DHLNQLASQF DTKLTKLRNE LQDTNDKLIT SDTERNALRN1440
 1441 ELQKLSQELK FGNEQIQRKS DEYQTTIDDL AHSHRVSEDS RLNALQELEA RKYEINDLTS1500
 1501 RLDSTEQRLA TLQQDYIKAD SERDILSDAL RRFQSSANRV INFHTFVDGG AGYVDGVPGG1560
 1561 TSVIGGGPSA QRSGAYDPSS GGVIGSGISG GPGGSDFGRE IEIGRGDSDQ SDVAYPRSVP1620
 1621 FPPSADFSSG RPGAASAGGR VINNLDGTTT VNMNGGFDIA NLEGTLQSLL NKIEKLEMER1680
 1681 NELRDTLARM KKKTTETHTT INQKETRYRN IEDNLQDAEE ERRALESRLQ SAKTLLRSQE1740
 1741 EALKQRDEER RQMKSKMVAA ELQARGKEAQ LRHLNEQLKN LRTDLDNAHT DIRSLRDKEE1800
 1801 QWDSSRFQLE TKMRESDSDT NKYQLQIASF ESERQILTEK IKELDGALRL SDSKVQDMKD1860
 1861 DTDKLRRDLT KAESVENELR KTIDIQSKTS HEYQLLKDQL LNTQNELNGA NNRKQQLENE1920
 1921 LLNVRSEVRD YKQRVHDVNN RVSELQRQLQ DANTEKNRVE DRFLSVEKVV NTMRTTETDL1980
 1981 RQQLETAKNE KRVATKELED LKRRLAQLEN ERRNSSQLSD GWKKEKITLL KKIELLENEK2040
 2041 RRTDAAIRET ALQREAIEKS LNAMERENKE LYKNCAQLQQ QIAQLEMENG NRILELTNKQ2100
 2101 REEQERQLIR MRQEKGQIEK VIENRERTHR NRIKQLEDQI AILRDQLDGE RRRRREYVDR2160
 2161 SMVNDIGRLG SNVLGIRNSY GDNSIDAIIN GGSRSVGFYP RSTFASNPLT PPLGSSTPTH2220
 2221 RPHVTDFRSA VDAGSSYRRP ISTIEDSGME VTFNTYPPEV SKLQQNTPVI RVHRRSVYGG2280
 2281 SIRDRDSVYG GGGRDSSFGT RAGDSISRAG VEPRDPSLVE IPSNEPPMTT STHSQGGSRY2340
 2341 DTLAPNRDDL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	None Entered	No Comments	Cheeseman, I.M., et al. (2004)
View Run	gi\|7499968	No Comments	Cheeseman, I.M., et al. (2004)
View Run	hcp-1	hcp1 IP from december2004	Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: lfi-1

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: