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Protein Overview: xol-1

General Information:
Name(s) found: xol-1 / CE35709 [WormBase]
Description(s) found:
Found 27 descriptions.
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  • WBGene00006962 locus:xol-1 XO lethal protein 1 status:Partially_confirmed UniProt:Q23229 protein_id:CCD65063.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 417 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ICLink to PubMed article]
    Biological Process: male sex determination [IMPLink to PubMed article]
    proteolysis [IEALink to PubMed article]
    dosage compensation, by inactivation of X chromosome [IMPLink to PubMed article]
    Molecular Function: subtilase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVEANSERR VKILGIDRSE NSPVLTYMET EDDPNFRNSK LAAAPHTVHM MDSGFLAINR  60
   61 QCLVKGKAIL AREPKSSNEH MIDDLPKHAH DQHTLSILRD FIDQLKLHNV YEINFYDPLD 120
  121 SSGKLAVIPM LIALWKCMLA SETDICDQEV LKSIMNSVIA KFELQIPCKN AVIDATLSGS 180
  181 REEVHIIAED GSLENSNGTT EHFNKKHDLV FVKTDLHPED FTPQMFPSQA KAKLLRDAFN 240
  241 NEEDEDTFPD ILVPAYMTAH SKNRVRQEDY TCLEVEFDSQ VALEKLMNEH EQVEGFEVQQ 300
  301 GGILVALKKD SFFDDELIEK IAIAIATESR QSVSSVSFDL LKLGPGASLV TLANSRRFEP 360
  361 ECRVVLQIEV KPVSPGETSS EGISDEHHYE EYDEDDIMEE EEAPSARQDD TYDEDEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..417] PSI-BLAST 1000.0 Early switch protein XOL-1, N-terminal domain; Early switch protein XOL-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.49103392871198 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.85018644815049 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.75408506104351 bayes_pls_golite062009
  • DNA binding
    		•  1.43729250025929 bayes_pls_golite062009
  • deacetylase activity
    		•  1.2639956188508 bayes_pls_golite062009
  • catalytic activity
    		•  0.836142537655721 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.490196380687208 bayes_pls_golite062009
  • mRNA binding
    		•  0.396503273803591 bayes_pls_golite062009
  • structural molecule activity
    		•  0.291495994536274 bayes_pls_golite062009
  • protein binding
    		•  0.0913090112555771 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle