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Protein Overview: cup-5

General Information:
Name(s) found: cup-5 / CE34586 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00000846 locus:cup-5 status:Confirmed UniProt:Q8T666 protein_id:CCD63598.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 668 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    cytoplasmic membrane-bounded vesicle [IDALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    apoptosis [IMPLink to PubMed article]
    regulation of endocytosis [IMPLink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    calcium channel activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRSTTDRS DFNDNASNAS SNASRRPTIN FQEIMEDLPH HERETGERLR RHLQFFFMNP  60
   61 MEKWKVRHQL PYKLVLQVLK IVFVTMQLIL FAEMRMSHVD FLEDTTTVMR HRFLKEWNDD 120
  121 RDALQYPPAE GRYSVYDDQG LSEHLSFLIN SYYSIRNDSF ASFSYDVVSH PSGNLGAQIS 180
  181 FESIPPIEVL IDRISNVTVN NNTYNFDIRE VKDTKRLNLT ETEVFQIGQS DDAVRDILAT 240
  241 RGITFLPEDA LKISTVQFKF RLRTIHYSPT AGDQKPECYK ISVSIKFDNS RHTGQVHVTL 300
  301 STVVSYVNVC NGRIIKGQVS GVGWSFDTLL IGGTDIFVLI LCILSLILCC RALIKAHLLQ 360
  361 IKTSDYFENV LKNKITVTDQ LDFLNLWYVM IVVNDALIII GTVAKISIEF QDFDNSLFTL 420
  421 TSIFLGMGAL LVYVGVLRYF GFFSQYNILM LTLKRSAPNI MRFMTCAIVL YAGFLIAGWV 480
  481 IIGPYSMKFR TLAESSEALF SLLNGDDMFA TFYTINDSNT VIKVFGTVYI YLFVSLFIYV 540
  541 VLSLFIAIIM DAYEVVKDRY SDGLRAIEKR GCLRDFVESN PPPSELGSPT TRSAYAPSNL 600
  601 LNLAAGNDSS RALRALHAID NARDWLSSLR DGTRFQSFSN PLNDSNEDVL ADQNANGNDP 660
  661 HNSRPSNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] deduced N/A No confident structure predictions are available.
    2 View Details [205..668] PSI-BLAST 45.39794 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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