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Protein Overview: mig-13

General Information:
Name(s) found: mig-13 / CE34562 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00003245 locus:mig-13 status:Confirmed UniProt:H2KZ96 protein_id:CCD67085.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 356 amino acids

    Gene Ontology:
    Cellular Component: neuronal cell body [IDALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    axon [IDALink to PubMed article]
    Biological Process: positive regulation of cell migration [IMPLink to PubMed article]
    Molecular Function: molecular_function [NDLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICIIFLSDS ITSTCFYSGF FDGLDSRNEC KARLDRRLTG FSGLLYSHSK YGQEPYNTSR  60
   61 NCVLMLVAPI GYSIRVRALQ FDVASTENAR TCEKDTLHVF DHETTLDPES YAPARIDDIT 120
  121 SPGPIIGQFC GHFENRILNT SSHNALTLWW HSNPNGSNSK GFKLHWGSFR VSKTGNCVTG 180
  181 EFSCGNGECI PIESACDRFA DCSNGEDLIH SRQMAANCQN IELDPLTTVS GVFVLLFSAT 240
  241 IILSLCGFIM FVCCLCKCLK STIPIKGASS HTTTTTATDY KPDPPQFYPP SPPKMPPPSA 300
  301 ASSYTPRLHH HFEGPLVPSE TSAFHSSNRM QNHYSVNSDI NGDYTYVRND VHRNLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..356] PSI-BLAST 40.522879 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.30744405151563 bayes_pls_golite062009
  • receptor binding
    		•  1.70177010329948 bayes_pls_golite062009
  • binding
    		•  1.63967303762968 bayes_pls_golite062009
  • ErbB-2 class receptor binding
    		•  0.754940749066971 bayes_pls_golite062009
  • ErbB-3 class receptor binding
    		•  0.62427086336325 bayes_pls_golite062009
  • growth factor activity
    		•  0.59278308192712 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle