| Protein: | mig-13 |
| Organism: | Caenorhabditis elegans |
| Length: | 356 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-13.
| Description | E-value | Query Range |
Subject Range |
|
|
213.0 | [0..5] | [356..258] |
|
Region A: Residues: [1-356] |
1 11 21 31 41 51
| | | | | |
1 MICIIFLSDS ITSTCFYSGF FDGLDSRNEC KARLDRRLTG FSGLLYSHSK YGQEPYNTSR 60
61 NCVLMLVAPI GYSIRVRALQ FDVASTENAR TCEKDTLHVF DHETTLDPES YAPARIDDIT 120
121 SPGPIIGQFC GHFENRILNT SSHNALTLWW HSNPNGSNSK GFKLHWGSFR VSKTGNCVTG 180
181 EFSCGNGECI PIESACDRFA DCSNGEDLIH SRQMAANCQN IELDPLTTVS GVFVLLFSAT 240
241 IILSLCGFIM FVCCLCKCLK STIPIKGASS HTTTTTATDY KPDPPQFYPP SPPKMPPPSA 300
301 ASSYTPRLHH HFEGPLVPSE TSAFHSSNRM QNHYSVNSDI NGDYTYVRND VHRNLL
|
| Detection Method: |  |
| Confidence: | 40.522879 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 2.30744405151563 | bayes_pls_golite062009 |
| receptor binding | 1.70177010329948 | bayes_pls_golite062009 |
| binding | 1.63967303762968 | bayes_pls_golite062009 |
| ErbB-2 class receptor binding | 0.754940749066971 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 0.62427086336325 | bayes_pls_golite062009 |
| growth factor activity | 0.59278308192712 | bayes_pls_golite062009 |
