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Protein Overview: CE34214

General Information:
Name(s) found: CE34214 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00012105 Putative neutral sphingomyelinase status:Confirmed UniProt:O45870 protein_id:CAB04885.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPSSEQESQ ESQKVDMEPV FRRESFAALR RNNVAARQLR VVTLNAWCLP QPWPIGSTDR  60
   61 VHRLNKIGQY MIDELYDIVG LQELWSYYDF VRLSEQVSSV YPYFHYFHSG FTGSGVCVFS 120
  121 RHPIVSTLTN RYSLNGFAHH IHRGDWFGGK VVGLTEIEID GDLRVNFYTT HLHAEYDREN 180
  181 DLYLPHRTAQ AFELAQFVRH TARGADVVIV TGDLNMEPCD LGFRLILSHA KLFDAWRMSH 240
  241 EVENEDSEGE LLKFRGIAKG GTCDRPDNCY TKRALKNVDD SKRIDYMLFK SGRCNVKLEE 300
  301 CEITLNQIPG EDLNYSDHVG LRARFTIDDR FRHEKSVNTW EPNRPLLIEA IGLVAGGERR 360
  361 ARTDRIFFFI LAVICLILIL GSLFFEVFPM GFAVLRFALT VVGVFFVWQG LIGLTLERKA 420
  421 LKAAKQAIQQ ILNN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] PSI-BLAST 44.39794 DNA repair endonuclease Hap1
    2 View Details [332..434] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • inositol or phosphatidylinositol phosphatase activity
    		•  3.64123197004285 bayes_pls_golite062009
  • phosphatidylinositol bisphosphate phosphatase activity
    		•  3.0061663893933 bayes_pls_golite062009
  • phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
    		•  2.90758198006555 bayes_pls_golite062009
  • phosphoinositide 5-phosphatase activity
    		•  2.90758198006555 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  2.26056838384313 bayes_pls_golite062009
  • hydrolase activity
    		•  2.21673584332033 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.87742719915012 bayes_pls_golite062009
  • catalytic activity
    		•  1.76511376991978 bayes_pls_golite062009
  • inositol-polyphosphate 5-phosphatase activity
    		•  1.69034937361985 bayes_pls_golite062009
  • inositol trisphosphate phosphatase activity
    		•  1.67310905470506 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  1.24865228320008 bayes_pls_golite062009
  • nuclease activity
    		•  1.10772848766193 bayes_pls_golite062009
  • binding
    		•  0.762705099992601 bayes_pls_golite062009
  • lipid phosphatase activity
    		•  0.494223168454777 bayes_pls_golite062009
  • exodeoxyribonuclease activity
    		•  0.469778612465362 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  0.466524009072462 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  0.414974033231176 bayes_pls_golite062009
  • exonuclease activity
    		•  0.408287239827419 bayes_pls_golite062009
  • protein binding
    		•  0.224287899263963 bayes_pls_golite062009
  • phosphatase activity
    		•  0.00559251346312178 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0053559034506292 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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