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View Structure Prediction Details

Protein: CE34214
Organism: Caenorhabditis elegans
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34214.

Description E-value Query
Range
Subject
Range
gi|83767183 - gi|83767183|dbj|BAE57322.1| unnamed protein product [Aspergillus oryzae]
gi|169769709 - gi|169769709|ref|XP_001819324.1| hypothetical protein [Aspergillus oryzae RIB40]
243.0 [0..32] [433..9]

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Predicted Domain #1
Region A:
Residues: [1-331]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPSSEQESQ ESQKVDMEPV FRRESFAALR RNNVAARQLR VVTLNAWCLP QPWPIGSTDR  60
   61 VHRLNKIGQY MIDELYDIVG LQELWSYYDF VRLSEQVSSV YPYFHYFHSG FTGSGVCVFS 120
  121 RHPIVSTLTN RYSLNGFAHH IHRGDWFGGK VVGLTEIEID GDLRVNFYTT HLHAEYDREN 180
  181 DLYLPHRTAQ AFELAQFVRH TARGADVVIV TGDLNMEPCD LGFRLILSHA KLFDAWRMSH 240
  241 EVENEDSEGE LLKFRGIAKG GTCDRPDNCY TKRALKNVDD SKRIDYMLFK SGRCNVKLEE 300
  301 CEITLNQIPG EDLNYSDHVG LRARFTIDDR F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.39794
Match: 1e9nA
Description: DNA repair endonuclease Hap1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
inositol or phosphatidylinositol phosphatase activity 3.64123197004285 bayes_pls_golite062009
phosphatidylinositol bisphosphate phosphatase activity 3.0061663893933 bayes_pls_golite062009
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity 2.90758198006555 bayes_pls_golite062009
phosphoinositide 5-phosphatase activity 2.90758198006555 bayes_pls_golite062009
phosphoric ester hydrolase activity 2.26056838384313 bayes_pls_golite062009
hydrolase activity 2.21673584332033 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 1.87742719915012 bayes_pls_golite062009
catalytic activity 1.76511376991978 bayes_pls_golite062009
inositol-polyphosphate 5-phosphatase activity 1.69034937361985 bayes_pls_golite062009
inositol trisphosphate phosphatase activity 1.67310905470506 bayes_pls_golite062009
deoxyribonuclease activity 1.24865228320008 bayes_pls_golite062009
nuclease activity 1.10772848766193 bayes_pls_golite062009
binding 0.762705099992601 bayes_pls_golite062009
lipid phosphatase activity 0.494223168454777 bayes_pls_golite062009
exodeoxyribonuclease activity 0.469778612465362 bayes_pls_golite062009
exodeoxyribonuclease activity, producing 5'-phosphomonoesters 0.466524009072462 bayes_pls_golite062009
exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 0.414974033231176 bayes_pls_golite062009
exonuclease activity 0.408287239827419 bayes_pls_golite062009
protein binding 0.224287899263963 bayes_pls_golite062009
phosphatase activity 0.00559251346312178 bayes_pls_golite062009
nucleic acid binding 0.0053559034506292 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [332-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RHEKSVNTWE PNRPLLIEAI GLVAGGERRA RTDRIFFFIL AVICLILILG SLFFEVFPMG  60
   61 FAVLRFALTV VGVFFVWQGL IGLTLERKAL KAAKQAIQQI LNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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