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Protein Overview: rme-1

General Information:
Name(s) found: rme-1 / CE33335 [WormBase]
Description(s) found:
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  • WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q86S80 protein_id:CCD72163.1 [WormBase]
  • gi|72000906|ref|NP_001024197.1| Receptor Mediated Endocytosis family member (rme-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|27885035|gb|AAO25981.1| Receptor mediated endocytosis protein 1, isoform f [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Receptor mediated endocytosis protein 1, isoform f [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33335 WBGene00004373 locus:rme-1 status:Confirmed TR:Q86S80 protein_id:AAO25981.1 [wormpep150.fasta]
  • 33335 WBGene00004373 locus:rme-1 status:Confirmed TR:Q86S80 protein_id:AAO25981.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:rme-1 status:Confirmed TR:Q86S80 protein_id:AAO25981.1 [wormpep115.fasta.reversed]
  • CE33335 WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q86S80_CAEEL protein_id:AAO25981.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33335 WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q86S80_CAEEL protein_id:AAO25981.1| [wormORF-contam.fasta]
  • Receptor Mediated Endocytosis family member (rme-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33335 WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q86S80 protein_id:AAO25981.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33335 WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q86S80 protein_id:CCD72163.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of G5ECC3, Receptor Mediated Endocytosis OS=Caenorhabditis elegans GN=rme-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    endomembrane system [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: receptor-mediated endocytosis [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    protein binding [TASLink to PubMed article]
    GTPase activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSWLGGDSS KKKNKEVLET VSEGLRKIYK QKLLPLEEFH KFHDFHSPAL DDPDFDAKPM  60
   61 ILLVGQYSTG KTTFIRYLLE SDFPGIRIGP EPTTDRFIAV MHGDEEGSIP GNALVVDAKK 120
  121 QFRALSGFGN AFLNRFQCST LPNQVLESVT IVDTPGILSG EKQRIDRGYD FTGVLEWFAE 180
  181 RVDRIILLFD AHKLDISDEF KRCIEALAGN EDKIRIVLNK SDMVDHQQLM RVYGALMWSL 240
  241 GKVFKTPEVS RVYLGSFWDH PLHYDLNRRL FQDEQHDLFQ DLQALPRNAA LRKLNDLIKR 300
  301 ARLAKVHAYI IAELRKQMPS MIGKDKKKKD LIQNLDKIYE QLQREHNISP GDFPDVNKMR 360
  361 EKLQTQDFSK FNPLKPKLLE VVDGMLATDI ARLMAQIPKE EAAAPAGSNG SADPTVRGGA 420
  421 FSQTTEAETP FGFGRGEGFD KGADEAEWVV SRERTTADST FESLGPVNGY LSGRAAKEHM 480
  481 VKSKLPNSVL GKVWKLADID KDGQLDADEF ALANYLINLK LEGHEIPSEL PKHLIPPSKR 540
  541 GEQDPVYPSL NDNDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..555] PSI-BLAST 100.0 No description for 2qptA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle