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Protein Overview: eft-4

General Information:
Name(s) found: eft-4 / CE33154 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00001169 locus:eef-1A.2 status:Confirmed UniProt:Q86NF3 protein_id:CCD68026.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 267 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ICLink to PubMed article][IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    selenocysteine incorporation [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    translational elongation [IEALink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    translation elongation factor activity [IEALink to PubMed article]
    GTPase activity [IEALink to PubMed article]
    translation factor activity, nucleic acid binding [ISSLink to PubMed article]
    transferase activity, transferring phosphorus-containing groups [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKEKVHINI VVIGHVDSGK STTTGHLIYK CGGIDKRTIE KFEKEAQEMG KGSFKYAWVL  60
   61 DKLKAERERG ITIDIALWKF ETAKYYITII DAPGHRDFIK NMITGTSQAD CAVLVVACGT 120
  121 GEFEAGISKN GQTREHALLA QTLGVKQLVS LRSPTRSPDS SRRSDTIQRL FHLSQSPDST 180
  181 ETTCLRSPRT CHGSRDGLLN ARKETLPERP SSRLLTPSSH HNAQLTDHSV FHSRMCTRSE 240
  241 ELEPSQSDVL RPESSSQEWS SPSPHRT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..267] PSI-BLAST 86.045757 Elongation factor eEF-1alpha, domain 2; Elongation factor eEF-1alpha, C-terminal domain; Elongation factor eEF-1alpha, N-terminal (G) domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle