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View Structure Prediction Details

Protein: eft-4
Organism: Caenorhabditis elegans
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for eft-4.

Description E-value Query
Range
Subject
Range
gi|167234441, gi... - gi|91094415|ref|XP_966353.1| PREDICTED: similar to CG8280-PA, isoform A isoform 1 [Tribolium castane...
341.0 [0..1] [266..1]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKEKVHINI VVIGHVDSGK STTTGHLIYK CGGIDKRTIE KFEKEAQEMG KGSFKYAWVL  60
   61 DKLKAERERG ITIDIALWKF ETAKYYITII DAPGHRDFIK NMITGTSQAD CAVLVVACGT 120
  121 GEFEAGISKN GQTREHALLA QTLGVKQLVS LRSPTRSPDS SRRSDTIQRL FHLSQSPDST 180
  181 ETTCLRSPRT CHGSRDGLLN ARKETLPERP SSRLLTPSSH HNAQLTDHSV FHSRMCTRSE 240
  241 ELEPSQSDVL RPESSSQEWS SPSPHRT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.045757
Match: 1f60A
Description: Elongation factor eEF-1alpha, domain 2; Elongation factor eEF-1alpha, C-terminal domain; Elongation factor eEF-1alpha, N-terminal (G) domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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