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Protein Overview: odr-4

General Information:
Name(s) found: odr-4 / CE32954 [WormBase]
Description(s) found:
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  • WBGene00003851 locus:odr-4 Odorant response abnormal protein 4 status:Confirmed UniProt:Q8I7F8 protein_id:CCD70713.1 [WormBase]
  • gi|71992307|ref|NP_001022815.1| ODoRant response abnormal family member (odr-4) [Caenorhabditis elegans] [NCBI NR]
  • gi|26251558|gb|AAN84809.1| Odorant response abnormal protein 4, isoform c [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Odorant response abnormal protein 4, isoform c [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE32954 WBGene00003851 locus:odr-4 status:Confirmed TR:Q8I7F7 protein_id:AAN84809.1 [wormpep150.fasta]
  • 32954 WBGene00003851 locus:odr-4 status:Confirmed TR:Q8I7F7 protein_id:AAN84809.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:odr-4 status:Partially_confirmed TR:Q8I7F7 protein_id:AAN84809.1 [wormpep115.fasta.reversed]
  • CE32954 WBGene00003851 locus:odr-4 status:Confirmed UniProt:Q8I7F8 protein_id:AAN84809.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32954 WBGene00003851 locus:odr-4 status:Confirmed UniProt:Q8I7F8 protein_id:AAN84809.1| [wormORF-contam.fasta]
  • ODoRant response abnormal family member (odr-4) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32954 WBGene00003851 locus:odr-4 status:Confirmed UniProt:Q8I7F8 protein_id:CCD70713.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE32954 WBGene00003851 locus:odr-4 status:Confirmed UniProt:Q8I7F8 protein_id:CCD70713.1 Odorant response abnormal protein 4 [wormpep246-ecoli-contam.fasta]
  • Isoform of Q8I7F8, Isoform c of Odorant response abnormal protein 4 OS=Caenorhabditis elegans GN=odr-4 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDALink to PubMed article]
    Biological Process: protein localization [IMPLink to PubMed article]
    chemosensory behavior [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRNRRKSKT TATSHPELHL EKVDPMKTES MILFDVQLQE WVTKSAKNHE FVLSDKGIPA  60
   61 SAYFLLGSFC SDGDIHVAYA SKCPVHSSAL EENATESSKM LEDEWMSDHA ERLLRMLPGG 120
  121 IHVVGIAWFS DKKTFSDRKS HIHKTLGRIQ KMNNQITTAN VDDSISDNMI TVFFETPSTT 180
  181 PIGAIIDVTN RGNDSAQKVQ FQKLEWISLV TNASARIVHN VPVDTGRPTD FYSDLVVATK 240
  241 NFVNNLFQCE FTLLDGEIRD DKEPLIKDIK KNKKTTIEAQ LFLNPLYNRE LGAIDDIASN 300
  301 MHEVLFDIEV RAAVPIRSTV KDAIRAIKHH LVRNLFARVE LHYESMEVVE EERSPKTGIT 360
  361 VHQLPRPATT VLYTHPAILI NDFLFEADNV EDAQKNFDDM MDLQTSIEHV DEGWERALTP 420
  421 EEMEAVRTPI EDLHFVDFDG SSDSWCTTKT ILITIALIIG LLASIIYFTV AHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] MSA 3.027963 View MSA. No confident structure predictions are available.
    2 View Details [157..226] deduced N/A No confident structure predictions are available.
    3 View Details [227..473] MSA 2.02696 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle