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Protein Overview: CE32856

General Information:
Name(s) found: CE32856 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00017262 status:Confirmed UniProt:Q22945 protein_id:CCD65594.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 358 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    extracellular polysaccharide biosynthetic process [IEALink to PubMed article]
    steroid biosynthetic process [IEALink to PubMed article]
    galactose metabolic process [IEALink to PubMed article]
    cellular metabolic process [IEALink to PubMed article]
    Molecular Function: 3-beta-hydroxy-delta5-steroid dehydrogenase activity [IEALink to PubMed article]
    NADP or NADPH binding [IEALink to PubMed article]
    coenzyme binding [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    UDP-glucose 4-epimerase activity [IEALink to PubMed article]
    steroid delta-isomerase activity [IEALink to PubMed article]
    L-aminoadipate-semialdehyde dehydrogenase activity [IEALink to PubMed article]
    ADP-glyceromanno-heptose 6-epimerase activity [IEALink to PubMed article]
    dTDP-4-dehydrorhamnose reductase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNLRVFGRI HNARRNYSPL PVDPLLRFKT ISQTQKAPRV LITGSLGQLG RGLNSVYKYM  60
   61 YGSECVVMSD IVRLPANATD VSDYNYLDIL NQGSIEEIVV NKNIDTIVHF SALLSAVGET 120
  121 NVPLALQVNC RGVENILQVA AKHKLKVFIP STIGAFGPTT PRENTPDLTV QCPTTIYGVS 180
  181 KVYAERLGEY FNHRFGVDFR SMRFPGIISA TKPGGGTTDY AIQIFYDALQ KGKHTCYLRP 240
  241 DTRLPMMYDT DCMASVIQLL AADSQSLKRR TYNVTGFSFT PEEIADAIRR VMPGFEIDYD 300
  301 ICPTRQSIAD SWPMSLDDSE ARKDWGWNPE YGLDETVQVM FALLRREEDK PTKIVSTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..358] PSI-BLAST 82.221849 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.03099072397093 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.442294542097958 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle