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Protein Overview: CE32542

General Information:
Name(s) found: CE32542 [WormBase]
Description(s) found:
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  • WBGene00013489 status:Confirmed UniProt:Q8I4C0 protein_id:CAD56615.1 [WormBase]
  • gi|32567349|ref|NP_872207.1| hypothetical protein Y69H2.14 [Caenorhabditis elegans] [NCBI NR]
  • gi|25005161|emb|CAD56615.1| C. elegans protein Y69H2.14, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32542 WBGene00013489 status:Confirmed TR:Q8I4C0 protein_id:CAD56615.1 [wormpep150.fasta]
  • 32542 WBGene00013489 status:Confirmed TR:Q8I4C0 protein_id:CAD56615.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • COLlagen structural gene (col-42) [Caenorhabditis elegans]gi|25005161|emb|CAD56615.1| Hypothetical protein Y69H2.14 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q8I4C0 protein_id:CAD56615.1 [wormpep115.fasta.reversed]
  • CE32542 WBGene00013489 status:Confirmed UniProt:Q8I4C0_CAEEL protein_id:CAD56615.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32542 WBGene00013489 status:Confirmed UniProt:Q8I4C0_CAEEL protein_id:CAD56615.1| [wormORF-contam.fasta]
  • Hypothetical protein Y69H2.14 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y69H2.14 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32542 WBGene00013489 status:Confirmed UniProt:Q8I4C0 protein_id:CAD56615.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE32542 WBGene00013489 locus:col-42 status:Confirmed UniProt:Q8I4C0 protein_id:CAD56615.1 [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • COLlagen OS=Caenorhabditis elegans GN=col-42 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: phosphate transport [IEALink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDKQEYLRK ESEIGTLRSV ALGAVTITAF SLGTSILLLP LLFSHAQTVQ STLEHELQFC  60
   61 VLRSHDLFDE LRKVEAVTGQ QSRIKRQYVT GPMGGGGGYG GGGYGHQQQQ QNYGHQGYAQ 120
  121 RPQQPQPVYR PSAPVYQPQP QVQSSICIFG PPGPPGFPGS DGQPGRDGEA GAPGQPGRDG 180
  181 AGGYGGPQQN DCQTCAPARQ GAPGPPGPAG QPGQPGEPGH SDTSSTAGPP GPPGPGGPPG 240
  241 QDGHPGDAGA PGAPGQVVAG PGSVGPPGPQ GPPGLAGPDG QPGHGGGGQP GPQGPPGDDG 300
  301 HPGEDGGAGG PGQPGQDGGS GGSGACDHCP PPRVAPGY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] PSI-BLAST 33.69897 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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