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View Structure Prediction Details

Protein: CE32542
Organism: Caenorhabditis elegans
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32542.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
290.0 [0..54] [336..1440]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDKQEYLRK ESEIGTLRSV ALGAVTITAF SLGTSILLLP LLFSHAQTVQ STLEHELQFC  60
   61 VLRSHDLFDE LRKVEAVTGQ QSRIKRQYVT GPMGGGGGYG GGGYGHQQQQ QNYGHQGYAQ 120
  121 RPQQPQPVYR PSAPVYQPQP QVQSSICIFG PPGPPGFPGS DGQPGRDGEA GAPGQPGRDG 180
  181 AGGYGGPQQN DCQTCAPARQ GAPGPPGPAG QPGQPGEPGH SDTSSTAGPP GPPGPGGPPG 240
  241 QDGHPGDAGA PGAPGQVVAG PGSVGPPGPQ GPPGLAGPDG QPGHGGGGQP GPQGPPGDDG 300
  301 HPGEDGGAGG PGQPGQDGGS GGSGACDHCP PPRVAPGY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle