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Protein Overview: CE32233

General Information:
Name(s) found: CE32233 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00013668 status:Partially_confirmed UniProt:Q8WQB6 protein_id:CAD21657.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 746 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: cation transport [IEALink to PubMed article]
    Molecular Function: cation transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAHDFVKKD DRNFTPTQSS RSASYFVVLV LTKILRCIGV FFVDILAKSS HIVNLLWLCK  60
   61 IICTCILFPL QKPLSAGKSL KRGIMPMVLK LSLMNSVIEV FWFYGITLCG PLRSVLVFEL 120
  121 SSTVLLSAVV SFFKGGNMST PSKTRGFFLL IVGFVALFLM DRDGTIEDPH HTTHAHHSGL 180
  181 NHLFYHLIGL FGMADHKGGL CILLISLLLR TGYETSFRHL AVEVGGAKRL HTLVTAGSAV 240
  241 CLTPVAVLSW ALSSSSGASI GYFHYAALLV IIAVFVFVLD FYAESICFQH VADPVMAAAR 300
  301 WSSVTMFSCA FGLAYLWYGS QNLGDHALTG GVSITVVCFI LASISLTHSN QPKHRGGHFV 360
  361 GISNTGLPLF TYGEAFLQRT SKSLMLFMKE TLNEILMNND SRRIFWFLCV NLGFCGVEFL 420
  421 YGFWTNSLGL ISDGFHMLFD CSALVMGLVA SVMARWPPTR HFTFGFGRVE ILSGFINALF 480
  481 LCVIALFILI EALERLFDPP NINTDRLLFV AISGLIVNLF GMYSLGEHGH SHGGGSSHGH 540
  541 SHGGGGSHGH SHGGGGNANM QGVFLHVLAD TLGSVFVIIS TLLIQWFGWV WVDPLCSLIL 600
  601 SLLIIGSVYP LLVSSISTLL QDVPEEEEFE YHINEILEIE HVESYSNAHM WQHKSDINVA 660
  661 SVHVQVKEEA NAQMIRHRVS NILKSTGATH STVQVEKKTF AHRIQQVCPG YKAGYTVVRG 720
  721 SVIREKKHDH SHHHGHSHDD HSGHHH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] MSA 1.012974 View MSA. No confident structure predictions are available.
    2 View Details [91..169] deduced N/A No confident structure predictions are available.
    3 View Details [170..321] MSA 1.04197 View MSA. No confident structure predictions are available.
    4 View Details [322..382] deduced N/A No confident structure predictions are available.
    5 View Details [383..746] PSI-BLAST 49.39794 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  6.60087208506814 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.49419690808578 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  6.066906606566 bayes_pls_golite062009
  • transporter activity
    		•  4.27173462293249 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  4.19993137135137 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.18558383943492 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  3.30217266286364 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  2.65640147236 bayes_pls_golite062009
  • cation channel activity
    		•  2.58631873778428 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  2.32644140472297 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.19343183150052 bayes_pls_golite062009
  • ion channel activity
    		•  2.03125515494926 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.95530036989194 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.95111816239105 bayes_pls_golite062009
  • channel activity
    		•  1.95111816239105 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  1.31663166812163 bayes_pls_golite062009
  • binding
    		•  1.27456652114636 bayes_pls_golite062009
  • cadmium ion transmembrane transporter activity
    		•  0.661906409169955 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  0.376948884172728 bayes_pls_golite062009
  • protein binding
    		•  0.311357063667067 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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