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Protein Overview: CE31840

General Information:
Name(s) found: CE31840 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00013225 status:Partially_confirmed UniProt:Q9U227 protein_id:CAB60513.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 616 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLATSAIAIF LIAWSAVFLI DYVLRVAHFE PYLRLSHRFG IEVSPFQLRF YVTPAPKDTL  60
   61 LSEKPTDIVV DEEKKRDIFF EESRRLKCRI LVIRMWFACG VIASIICLFG MTFYMSHLLI 120
  121 KDVGQWMTTA RPKVQAYRGM EYRSMHHVLT SLSPAVAPPP AKTTTAANSD QIHNPVIMED 180
  181 TEYDMIEDGQ KSEDRGLVPI IPGFNLPWGH IPIFMLVLIV AAVFHELGHA WAATSNGVTV 240
  241 NGFGIFILAV YPGAFTDIEA VTLKRATTFR RLQIFGAGIW HNLLLALLAM AMFHASPVIL 300
  301 SPVLANGYGV SVRGVDVRSG LSNPRTGLVA GDVVKSVDEC RVETVADWWR CIRTSKNMNN 360
  361 GRCVDRESVE AATAFNHRTE ADEILCCDEF NVTTAHVCFQ REEKASKLSV DTQTRAPQLN 420
  421 ALLGLEGGGG GRDDALPYGG VAQPEEKKIT KYSCLHARYV VQQALCNASE PCKTEETPAA 480
  481 HQEKICVYPA LHNGTRLVKI ELANRNKPIL FVGQLNEMLE MVSISSFTPR FTFASISWLE 540
  541 HFELTAKYLF TLSLALGLFN AMPVYALDGQ FIVHTLLKSS GLSVRRRELF QYLILTFGTG 600
  601 VLILNIVIGF VKLAIN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..222] deduced N/A No confident structure predictions are available.
    2 View Details [223..482] PSI-BLAST 25.39794 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain
    3 View Details [483..616] MSA 9.375995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.72140630069624 bayes_pls_golite062009
  • protein binding
    		•  1.54045195100026 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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