YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE31840
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLATSAIAIF LIAWSAVFLI DYVLRVAHFE PYLRLSHRFG IEVSPFQLRF YVTPAPKDTL  60
   61 LSEKPTDIVV DEEKKRDIFF EESRRLKCRI LVIRMWFACG VIASIICLFG MTFYMSHLLI 120
  121 KDVGQWMTTA RPKVQAYRGM EYRSMHHVLT SLSPAVAPPP AKTTTAANSD QIHNPVIMED 180
  181 TEYDMIEDGQ KSEDRGLVPI IPGFNLPWGH IPIFMLVLIV AAVFHELGHA WAATSNGVTV 240
  241 NGFGIFILAV YPGAFTDIEA VTLKRATTFR RLQIFGAGIW HNLLLALLAM AMFHASPVIL 300
  301 SPVLANGYGV SVRGVDVRSG LSNPRTGLVA GDVVKSVDEC RVETVADWWR CIRTSKNMNN 360
  361 GRCVDRESVE AATAFNHRTE ADEILCCDEF NVTTAHVCFQ REEKASKLSV DTQTRAPQLN 420
  421 ALLGLEGGGG GRDDALPYGG VAQPEEKKIT KYSCLHARYV VQQALCNASE PCKTEETPAA 480
  481 HQEKICVYPA LHNGTRLVKI ELANRNKPIL FVGQLNEMLE MVSISSFTPR FTFASISWLE 540
  541 HFELTAKYLF TLSLALGLFN AMPVYALDGQ FIVHTLLKSS GLSVRRRELF QYLILTFGTG 600
  601 VLILNIVIGF VKLAIN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle