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Protein Overview: CE32007

General Information:
Name(s) found: CE32007 [WormBase]
Description(s) found:
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  • WBGene00021215 status:Confirmed UniProt:Q8IU09 protein_id:CCD73411.1 [WormBase]
  • gi|32565429|ref|NP_871893.1| hypothetical protein Y18H1A.11 [Caenorhabditis elegans] [NCBI NR]
  • gi|23820807|gb|AAN39663.1| Hypothetical protein Y18H1A.11 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Partially_confirmed TR:Q8IU09 protein_id:AAN39663.1 [wormpep150.fasta]
  • 32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Predicted TR:Q8IU09 protein_id:AAN39663.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, cytidylyltransferase (1B157) [Caenorhabditis elegans]gi|23820807|gb|AAN39663.1| Hypothetical protein Y18H1A.11 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • 32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Partially_confirmed TR:Q8IU09 protein_id:AAN39663.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CTP:phosphocholine cytidylyltransferase status:Predicted TR:Q8IU09 protein_id:AAN39663.1 [wormpep115.fasta.reversed]
  • CE32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Confirmed UniProt:Q8IU09_CAEEL protein_id:AAN39663.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Confirmed UniProt:Q8IU09_CAEEL protein_id:AAN39663.1| [wormORF-contam.fasta]
  • Hypothetical protein Y18H1A.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y18H1A.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Confirmed TR:Q8IU09 protein_id:AAN39663.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Confirmed UniProt:Q8IU09 protein_id:AAN39663.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32007 WBGene00021215 CTP:phosphocholine cytidylyltransferase status:Confirmed UniProt:Q8IU09 protein_id:CCD73411.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE32007 WBGene00021215 status:Confirmed UniProt:Q8IU09 protein_id:CCD73411.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y18H1A.11 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: teichoic acid biosynthetic process [IEALink to PubMed article]
    biosynthetic process [IEALink to PubMed article]
    Molecular Function: nucleotidyltransferase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    metal ion binding [IEALink to PubMed article]
    glycerol-3-phosphate cytidylyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCDDTLAFCS PAPFSDDVEV IKQREAIDYS TQITLEDAIS GNVTRPVRVY ADGVYDMFHY  60
   61 GHANQFLQIK QTLPNVYLIV GVCSDEETMK NKGRTVQGEE ERYEAIRHCR YVDEVYKASP 120
  121 WTCPIPFLKE LKVDFMSHDA LPYQGPAGED IYEKHRTAGM FLETQRTEGI STSDSICRII 180
  181 RDYDTYVRRN LQRGYSATDL NVGFFTTSKY RLQDTVVGIK EMGRGLLQTW KTNADYLIEG 240
  241 FLTTFAISDP KPLPNNKSAD ENVENRENIE NF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] PSI-BLAST 30.0 CTP:glycerol-3-phosphate cytidylyltransferase
    2 View Details [196..272] MSA 1.638994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.84668360172717 bayes_pls_golite062009
  • ligase activity
    		•  0.41353894226697 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  0.1911539125531 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  0.1911539125531 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  0.178548924377401 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle