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Protein Overview: ttn-1

General Information:
Name(s) found: ttn-1 / CE31088 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00006436 locus:ttn-1 status:Partially_confirmed UniProt:G5EF69 protein_id:CCD72168.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 724 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    extracellular region [IEALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: DNA repair [IEALink to PubMed article]
    regulation of cell growth [IEALink to PubMed article]
    signal transduction [IEALink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    protein amino acid phosphorylation [IEALink to PubMed article]
    Molecular Function: magnesium ion binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    protein tyrosine kinase activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    non-membrane spanning protein tyrosine kinase activity [IEALink to PubMed article]
    protein kinase activity [IEALink to PubMed article]
    protein serine/threonine kinase activity [IEALink to PubMed article]
    insulin-like growth factor binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGNEKKGGG LPPTQQRHLN IDTTVGGSIS QPVSPSMSYS TDRETVMRSA SGHATVAETH  60
   61 LIRSIGSQSQ SYTEEHWSSE ITSFVALAPP KFIQVIKAYR VHSTDTISLV VEVASDPPAI 120
  121 FEWFYNEKSV LQDRDRFQVG HGINISRLKV SRPEQGVYKC VTRNPAGVST SYGYITVNAD 180
  181 REHLSSSKED MRLQRQHSVT YHQAPRFLTQ VPNLFVTAGS NVIIDVEVDA NPPARFSWFV 240
  241 NGKEYRDSIH GVEMFSPDVN RSVVRFSIPV AGEYKVVASN VHGSAMSCGH VDIQKERRTD 300
  301 GKLEKFQIEF KKKLVQIIEL EESTLTTSTT AFDPMTTSMR ALGNNGRNSR QAVNMFELNY 360
  361 TQRSSSVPRG VRHLESHIEV SNMTGEEKKT QQQTRTGDDD SSFEIVPPNL PEECAPKIVE 420
  421 PLHSASFLDG QAMSLRCKIT ANPSAAVVWS KDDVNVEDWV LNKDVTTTVL DGGVCELLNP 480
  481 ECFAEDAGLY KCTATNPHGT AETAAFINVE GAEYIKDHEE AEISESVLTD DVHIILPPKF 540
  541 IETLTAETDN FQQLGYVRMV ATVRSVAPIT VSWQKDGMDI YENEKYEVMQ FADGAQILTI 600
  601 RAPTNLDSGV YTCTAESEHG VSNSSCQVEL TISAESSPES FEKVEITPPE EVKETGIDDD 660
  661 IEVILKEEVS GTAQIEKREE EFKLLVKVAD QVASTLVANV FLEAVHEAVK KIVETEDVSL 720
  721 RLKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..724] PSI-BLAST 61.69897 Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle