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Protein Overview: coq-6

General Information:
Name(s) found: coq-6 / CE30815 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00000766 locus:coq-6 Probable ubiquinone biosynthesis monooxygenase coq-6 status:Confirmed UniProt:O01884 protein_id:CCD68612.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 451 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular aromatic compound metabolic process [IEALink to PubMed article]
    electron transport [IEALink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    ubiquinone biosynthetic process [IEALink to PubMed article][IMPLink to PubMed article]
    Molecular Function: FAD binding [IEALink to PubMed article]
    monooxygenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPGGTIIC ARNASSYYDT VIVGGGMVGN AMACSLGANK SFQSKSVLLL DAGRSPSLAS  60
   61 FKPGAPFNNR VVATSPTSID TFKKLGVWDQ INSHRTKKVN RLFVFDSCST SEIEFERGQQ 120
  121 EEVAFIIEND LIVGSLYEKL AEYKNVDVKT GAKVEDCSIP NALENMATIK LENGDVIETS 180
  181 LLIGADGVNS KVRHASNLDY TTFNYNQHGL VAIVNIETAN GKNETAWQRF TTLGPVALLP 240
  241 LSDTVSGLTW STSPEEAQRL KQLPSDQFVD ELNSALFSQN NQIPLVNQTI FALNRMNPFR 300
  301 TETFGRKAEG TTPPHVITVQ DKSRASFPLG FGNAHSYITT RCALIGDAAH RMHPLAGQGV 360
  361 NLGWSDVQIL DKVLGDAVRE GADIGSITYL REYDSAAQKH NLPVMVSVDL LNRLYRTDAP 420
  421 AIVAARAFGL NAFNSLGPVK NFLMNYLSAH R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..451] PSI-BLAST 46.09691 P-HYDROXYBENZOATE HYDROXYLASE (PHBH) MUTANT WITH CYS 116 REPLACED BY SER (C116S) AND ARG 42 REPLACED BY LYS (R42K), IN COMPLEX WITH FAD AND 4-HYDROXYBENZOIC ACID

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  1.94752631746117 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.52511707514198 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.45104542724719 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.18990628739838 bayes_pls_golite062009
  • antioxidant activity
    		•  1.12347155061135 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  0.876978863121464 bayes_pls_golite062009
  • binding
    		•  0.850689563354756 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH group of donors
    		•  0.643810447309487 bayes_pls_golite062009
  • protein binding
    		•  0.370064403093958 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.23045510393832 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.130601418359425 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  0.0438965603843511 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle