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Protein Overview: CE31500

General Information:
Name(s) found: CE31500 [WormBase]
Description(s) found:
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  • WBGene00009440 locus:idhg-1 status:Confirmed UniProt:Q20049 protein_id:CAA86325.2 [WormBase]
  • gi|25144293|ref|NP_497927.2| hypothetical protein F35G12.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|22265825|emb|CAA86325.2| C. elegans protein F35G12.2, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31500 WBGene00009440 isocitrate dehydrogenase status:Confirmed TR:Q20049 protein_id:CAA86325.2 [wormpep150.fasta]
  • 31500 WBGene00009440 isocitrate dehydrogenase status:Confirmed TR:Q20049 protein_id:CAA86325.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • isocitrate dehydrogenase (43.6 kD) (3F659) [Caenorhabditis elegans]gi|22265825|emb|CAA86325.2| Hypothetical protein F35G12.2 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • isocitrate dehydrogenase status:Confirmed TR:Q20049 protein_id:CAA86325.2 [wormpep115.fasta.reversed]
  • CE31500 WBGene00009440 isocitrate dehydrogenase status:Confirmed UniProt:Q20049_CAEEL protein_id:CAA86325.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31500 WBGene00009440 isocitrate dehydrogenase status:Confirmed UniProt:Q20049_CAEEL protein_id:CAA86325.2| [wormORF-contam.fasta]
  • F35G12.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F35G12.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31500 WBGene00009440 isocitrate dehydrogenase status:Confirmed UniProt:Q20049 protein_id:CAA86325.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31500 WBGene00009440 locus:idhg-1 isocitrate dehydrogenase status:Confirmed UniProt:Q20049 protein_id:CAA86325.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE31500 WBGene00009440 locus:idhg-1 status:Confirmed UniProt:Q20049 protein_id:CAA86325.2 [wormpep246-ecoli-contam.fasta]
  • CE31500 WBGene00009440 locus:idhg-1 status:Confirmed UniProt:Q20049 protein_id:CAA86325.2 Isocitrate dehydrogenase [NAD] subunit, mitochondrial [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Isocitrate dehydrogenase [NAD] subunit, mitochondrial OS=Caenorhabditis elegans GN=idhg-1 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    mitochondrion [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    metabolic process [IEALink to PubMed article]
    leucine biosynthetic process [IEALink to PubMed article]
    tricarboxylic acid cycle [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: isocitrate dehydrogenase (NAD+) activity [IEALink to PubMed article]
    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [IEALink to PubMed article]
    NAD or NADH binding [IEALink to PubMed article]
    isocitrate dehydrogenase (NADP+) activity [IEALink to PubMed article]
    tartrate dehydrogenase activity [IEALink to PubMed article]
    3-isopropylmalate dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNVLGHTL RSSKNVVQKA FVATSPNSDM LRFRSPVLQT NTTKLARYGG RHNVTVLPGD  60
   61 GIGPEMLHHV ERILSAVQAP VDFEVVNLTS KEDASEDLAE AITAIKRNGV ALKGNIETKF 120
  121 DNPSFVSRNL ELRRQLNLYA NVLHCSTIPT VPSRHTGIDM VIIRENTEGE YSGNEHEAVN 180
  181 APHPRVVESL KVVTREKSEQ ITRFAFQFAK KYGRKKVTAV HKANIQKLGD GLFLKVATDI 240
  241 AKAEYPDIEF NAMIVDNASM QLVSRPQQFD VMLMPNLYGN IISNIACGLV GGPGLVSGMN 300
  301 IGEDYAVFET GTRNTGTTLA GKDLANPTAF IRAAVDMLRF LGLQSHADMI SDSLFRTLVD 360
  361 KRIHTADIGG TSKSSELVQS VLDFIEKELE DRNYRV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 97.69897 No description for 2d1cA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle