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View Structure Prediction Details

Protein: CE31500
Organism: Caenorhabditis elegans
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE31500.

Description E-value Query
Range
Subject
Range
gi|187025101, gi... - gi|39591606|emb|CAE71183.1| Hypothetical protein CBG18040 [Caenorhabditis briggsae], gi|187025101|em...
gi|157775245 - gi|157775245|ref|XP_001665688.1| hypothetical protein CBG18040 [Caenorhabditis briggsae AF16]
419.0 [0..1] [396..1]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNVLGHTL RSSKNVVQKA FVATSPNSDM LRFRSPVLQT NTTKLARYGG RHNVTVLPGD  60
   61 GIGPEMLHHV ERILSAVQAP VDFEVVNLTS KEDASEDLAE AITAIKRNGV ALKGNIETKF 120
  121 DNPSFVSRNL ELRRQLNLYA NVLHCSTIPT VPSRHTGIDM VIIRENTEGE YSGNEHEAVN 180
  181 APHPRVVESL KVVTREKSEQ ITRFAFQFAK KYGRKKVTAV HKANIQKLGD GLFLKVATDI 240
  241 AKAEYPDIEF NAMIVDNASM QLVSRPQQFD VMLMPNLYGN IISNIACGLV GGPGLVSGMN 300
  301 IGEDYAVFET GTRNTGTTLA GKDLANPTAF IRAAVDMLRF LGLQSHADMI SDSLFRTLVD 360
  361 KRIHTADIGG TSKSSELVQS VLDFIEKELE DRNYRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.69897
Match: 2d1cA
Description: No description for 2d1cA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle