YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: col-112

General Information:
Name(s) found: col-112 / CE29928 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00000256 locus:bli-6 status:Confirmed UniProt:Q8MXR1 protein_id:CCD74181.1 [WormBase]
  • gi|25153764|ref|NP_741423.1| COLlagen family member (col-112) [Caenorhabditis elegans] [NCBI NR]
  • gi|21240744|gb|AAM44390.1|AC084197_28 Collagen protein 112, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep79.fasta]
  • CE29928 WBGene00000686 locus:col-112 status:Partially_confirmed TR:Q8MXR1 protein_id:AAM44390.1 [wormpep150.fasta]
  • 29928 WBGene00000686 locus:col-112 status:Partially_confirmed TR:Q8MXR1 protein_id:AAM44390.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • COLlagen structural gene (28.9 kD) (col-112) [Caenorhabditis elegans]gi|21240744|gb|AAM44390.1| Collagen protein 112 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:col-112 status:Partially_confirmed TR:Q8MXR1 protein_id:AAM44390.1 [wormpep115.fasta.reversed]
  • CE29928 status:Partially_confirmed protein_id:AAM44390.1 [wormpep80.hongbin]
  • CE29928 WBGene00000686 locus:col-112 status:Confirmed UniProt:Q8MXR1_CAEEL protein_id:AAM44390.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29928 WBGene00000686 locus:col-112 status:Confirmed UniProt:Q8MXR1_CAEEL protein_id:AAM44390.1| [wormORF-contam.fasta]
  • Collagen protein 112 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • COLlagen family member (col-112) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29928 WBGene00000686 locus:col-112 status:Confirmed TR:Q8MXR1 protein_id:AAM44390.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29928 WBGene00000686 locus:col-112 status:Confirmed UniProt:Q8MXR1 protein_id:AAM44390.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE29928 WBGene00000256 locus:bli-6 status:Confirmed UniProt:Q8MXR1 protein_id:CCD74181.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • BLIstered cuticle OS=Caenorhabditis elegans GN=bli-6 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: phosphate transport [IEALink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVETRVKAY RFVAYAAVTF SVVAVLSVCI TLPMVYNYVS HVKKGIHHEI RYCKGSAKDI  60
   61 LNEVSSIRSN RTARQASYGD SGAAGSAGAA GGSCSGCCLP GPAGPVGTPG KPGRPGKPGV 120
  121 AGLPGNPGRP PQAPCDPITP PPCKPCPQGP PGVQGPPGPA GDAGLDGQPG GPGQDGQPGQ 180
  181 PGPKGPPGVN GQPGAPGQDG NPGQDAPSEP LVPGEPGAPG EAGPQGPPGQ PGTPGQNGQP 240
  241 GQPGPKGPSG QPGQPGSDGN PGPAGQAGQA GSVGEKGICP KYCAIDGGIF FEDGTRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..297] PSI-BLAST 30.522879 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle