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Protein Overview: cup-5

General Information:
Name(s) found: cup-5 / CE30111 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00000846 locus:cup-5 status:Confirmed UniProt:Q8WSP3 protein_id:CCD63608.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    cytoplasmic membrane-bounded vesicle [IDALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    apoptosis [IMPLink to PubMed article]
    regulation of endocytosis [IMPLink to PubMed article]
    Molecular Function: ion channel activity [IEALink to PubMed article]
    calcium channel activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRSTTDRS DFNDNASNAS SNASRRPTIN FQEIMEDLPH HERETGERLR RHLQFFFMNP  60
   61 MEKWKVRHQL PYKLVLQVLK IVFVTMQLIL FAEMRMSHVD FLEDTTTVMR HRFLKEWNDD 120
  121 RDALQYPPAE GRYSVYDDQG LSEHLSFLIN SYYSIRNDSF ASFSYDVVSH PSGNLGAQIS 180
  181 FESIPPIEVL IDRISNVTVN NNTYNFDIRE VKDTKRLNLT ETEVFQIGQS DDAVRDILAT 240
  241 RGITFLPEDA LKISTVQFKF RLRTIHYSPT AGDQKPECYK ISVSIKFDNS RHTGQVHVTL 300
  301 STVVSYVNVC NGRIIKGVGW SFDTLLIGGT DIFVLILCIL SLILCCRALI KAHLLQIKTS 360
  361 DYFENVLKNK ITVTDQLDFL NLWYVMIVVN DALIIIGTVA KISIEFQFNK NTFTTRNDFD 420
  421 NSLFTLTSIF LGMGALLVYV GVLRYFGFFS QYNILMLTLK RSAPNIMRFM TCAIVLYAGF 480
  481 LIAGWVIIGP YSMKFRTLAE SSEALFSLLN GDDMFATFYT INDSNTVIKV FGTVYIYLFV 540
  541 SLFIYVVLSL FIAIIMDAYE VVKDRYSDGL RAIEKRGCLR DFVESNPPPS ELGSPTTRSA 600
  601 YAPSNLLNLG RCVPVEVTRI FLCSGFLHTF SFFLHLCTPN KLGC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] deduced N/A No confident structure predictions are available.
    2 View Details [161..644] PSI-BLAST 43.522879 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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