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Protein Overview: CE30273

General Information:
Name(s) found: CE30273 [WormBase]
Description(s) found:
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  • WBGene00017398 status:Confirmed UniProt:H2KZQ2 protein_id:CCD69301.1 [WormBase]
  • gi|25141318|ref|NP_490948.2| hypothetical protein F12B6.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|18652595|gb|AAL77178.1|AF003138_3 Hypothetical protein F12B6.2b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep79.fasta]
  • CE30273 WBGene00017398 status:Partially_confirmed TR:Q95R10 protein_id:AAL77178.1 [wormpep150.fasta]
  • 30273 WBGene00017398 status:Partially_confirmed TR:Q95R10 protein_id:AAL77178.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • similar to membrane glycoprotein; sodium dependent inorganic phosphate cotransporter; vesicular glutamate transporter (1C821) [Caenorhabditis elegans]gi|18652595|gb|AAL77178.1| Hypothetical protein F12B6.2b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q95R10 protein_id:AAL77178.1 [wormpep115.fasta.reversed]
  • CE30273 status:Partially_confirmed protein_id:AAL77178.1 [wormpep80.hongbin]
  • CE30273 WBGene00017398 status:Partially_confirmed UniProt:Q95R10_CAEEL protein_id:AAL77178.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30273 WBGene00017398 status:Partially_confirmed UniProt:Q95R10_CAEEL protein_id:AAL77178.1| [wormORF-contam.fasta]
  • F12B6.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F12B6.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE30273 WBGene00017398 status:Partially_confirmed UniProt:Q95R10 protein_id:AAL77178.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30273 WBGene00017398 status:Confirmed UniProt:H2KZQ2 protein_id:CCD69301.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: inorganic anion transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: inorganic anion transmembrane transporter activity [IEALink to PubMed article]
    phosphate transmembrane transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTCFGMAMV DIVRSGNGTF HPDLHMEWSG DEQANIHTSF YIGAFIAVFP SEFLAKKLGP  60
   61 KNLLSFALLL NIFGSLLTPF SAIYLRSYFP VAAIRLIMGF GYGFVIPAGS VLISSWFPLS 120
  121 EKSTAMAIFT TGNQIGIAVS MFLTAKLCQL HFFEGWPLVF IVYGLIGAVF LVIWHVRLAD 180
  181 KPRESKYITA TELTYIKGGK QRRNRAETIV RATPYMKIIL NGCVCAICAC SFAQSFVLVA 240
  241 LVTYLPKYNQ IAFKMNLTHN GIWSSLPFFI QMITKLLFAI IADKVKQRKV NATAVTKVSN 300
  301 AIASFASAIF IVIAAYGPFD SAELVQLSII VSMAAFSAYV PGYNTSIVTV APQFTAFISS 360
  361 YAQLYAQIAS TLAPIVIGRI TSHGTIYEWK CAFYSLAGVL AVTGLIFQIF GHGRTEPWGE 420
  421 TPSNATSARL STSVTMCEDG MCKLTLLEKH NHEFRTESKI SSGSGNLKKK VRCPRGVHDF 480
  481 AKFIFTKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..488] PSI-BLAST 46.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.52916479889426 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  2.32839532867295 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  2.32839532867295 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.78662033436109 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  1.6904339767429 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • binding
    		•  0.805286077372817 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle