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Protein Overview: sid-1

General Information:
Name(s) found: sid-1 / CE30331 [WormBase]
Description(s) found:
Found 24 descriptions.
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  • WBGene00004795 locus:sid-1 Systemic RNA interference defective protein 1 status:Confirmed UniProt:Q9GZC8 protein_id:CCD63011.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 776 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDALink to PubMed article]
    Biological Process: RNA interference [IMPLink to PubMed article]
    Molecular Function: serine-type endopeptidase inhibitor activity [IEALink to PubMed article]
    molecular_function [NDLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRVYLIILM HLVIGLTQNN STTPSPIITS SNSSVLVFEI SSKMKMIEKK LEANTVHVLR  60
   61 LELDQSFILD LTKVAAEIVD SSKYSKEDGV ILEVTVSNGR DSFLLKLPTV YPNLKLYTDG 120
  121 KLLNPLVEQD FGAHRKRHRI GDPHFHQNLI VTVQSRLNAD IDYRLHVTHL DRAQYDFLKF 180
  181 KTGQTTKTLS NQKLTFVKPI GFFLNCSEQN ISQFHVTLYS EDDICANLIT VPANESIYDR 240
  241 SVISDKTHNR RVLSFTKRAD IFFTETEISM FKSFRIFVFI APDDSGCSTN TSRKSFNEKK 300
  301 KISFEFKKLE NQSYAVPTAL MMIFLTTPCL LFLPIVINII KNSRKLAPSQ SNLISFSPVP 360
  361 SEQRDMDLSH DEQQNTSSEL ENNGEIPAAE NQIVEEITAE NQETSVEEGN REIQVKIPLK 420
  421 QDSLSLHGQM LQYPVAIILP VLMHTAIEFH KWTTSTMANR DEMCFHNHAC ARPLGELRAW 480
  481 NNIITNIGYT LYGAIFIVLS ICRRGRHEYS HVFGTYECTL LDVTIGVFMV LQSIASATYH 540
  541 ICPSDVAFQF DTPCIQVICG LLMVRQWFVR HESPSPAYTN ILLVGVVSLN FLISAFSKTS 600
  601 YVRFIIAVIH VIVVGSICLA KERSLGSEKL KTRFFIMAFS MGNFAAIVMY LTLSAFHLNQ 660
  661 IATYCFIINC IMYLMYYGCM KVLHSERITS KAKLCGALSL LAWAVAGFFF FQDDTDWTRS 720
  721 AAASRALNKP CLLLGFFGSH DLWHIFGALA GLFTFIFVSF VDDDLINTRK TSINIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 2.025985 View MSA. No confident structure predictions are available.
    2 View Details [188..289] MSA 2.027978 View MSA. No confident structure predictions are available.
    3 View Details [290..383] deduced N/A No confident structure predictions are available.
    4 View Details [384..566] MSA 3.035963 View MSA. No confident structure predictions are available.
    5 View Details [567..630] MSA 2.034996 View MSA. No confident structure predictions are available.
    6 View Details [631..776] MSA 1.032985 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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