Protein Overview: CE29416

General Information:
Name(s) found:	CE29416 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00019225 glycosyl hydrolases status:Partially_confirmed UniProt:O76632 protein_id:CCD72416.1 [WormBase] gi\|17568491\|ref\|NP_509140.1\| hypothetical protein H22K11.2 [Caenorhabditis elegans] [NCBI NR] gi\|15718608\|gb\|AAK39243.2\| Hypothetical protein H22K11.2 [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE29416 WBGene00019225 glycosyl hydrolases status:Partially_confirmed TR:O76632 protein_id:AAK39243.2 [wormpep150.fasta] 29416 WBGene00019225 glycosyl hydrolases status:Partially_confirmed TR:O76632 protein_id:AAK39243.2 [wormpep130-phg-ecoli-orf-rand.fasta] beta-galactosidase (XH405) [Caenorhabditis elegans]gi\|15718608\|gb\|AAK39243.2\| Hypothetical protein H22K11.2 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] glycosyl hydrolases status:Partially_confirmed TR:O76632 protein_id:AAK39243.2 [wormpep115.fasta.reversed] CE29416 glycosyl hydrolases status:Partially_confirmed TR:O76632 protein_id:AAK39243.2 [wormpep80.hongbin] CE29416 WBGene00019225 glycosyl hydrolases status:Partially_confirmed UniProt:O76632_CAEEL protein_id:AAK39243.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE29416 WBGene00019225 glycosyl hydrolases status:Partially_confirmed UniProt:O76632_CAEEL protein_id:AAK39243.2\| [wormORF-contam.fasta] H22K11.2 [Caenorhabditis elegans] [nr-271106-contam.fasta] Hypothetical protein H22K11.2 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE29416 WBGene00019225 glycosyl hydrolases status:Partially_confirmed UniProt:O76632 protein_id:AAK39243.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
Organism:	Caenorhabditis elegans
Length:	644 amino acids
Gene Ontology:
Cellular Component:	beta-galactosidase complex [IEA]
Biological Process:	carbohydrate metabolic process [IEA] metabolic process [IEA]
Molecular Function:	beta-galactosidase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRELALFLV CSVFATVFGT DSSPSFKIDT VNSQFLLDGD PFTYIAGEIH YFRIPHQKWD  60
   61 DRLKRVRALG FNAITVPVPW NLHQFYQDET PILSGNLDLV KFIKAAESNG LYTILRIGNR 120
  121 PYISAEWDNG GLPWWLIRNT KIGKYRSSDP SFMTEVTQWW KHLLPKIYPL MRKNAGPVLM 180
  181 VQIEHFYGAL GICDQQYLLQ LANMAKENLG NDVVLFTVNP PVLQFMRCGT LPNILPTIEI 240
  241 VPNANAGEIE SWFSMQKAFM QGAPAVASQF LINPFKLWGK NVSDPYPNNL IIQTAKTAFA 300
  301 LNASLSFHMT HGGTNFGYWN GAVDPYPVTT SYDSFAPISE AGDVNPLYIS IRNWISNIPG 360
  361 WQNPPTPIPA NLPRTAYPDV QLTVFDTISG FIIGANPECW SSPETPRTAE YIRQGYGYIY 420
  421 YNTTIIECGS LYIPTFADNA YIFLNQNFVG ALYKQFGSIH NNTIDVQGCL DQFNSLEIII 480
  481 EITGRDHNNY PVMSRGIQGN VYMRNITLEN WESCEVPIET YEISLVKNYE SLKQHVFETI 540
  541 DFEKSQSAAI EQPSVFIGNL IIKTAPADTF LDTRGWGKGV VTINQYNIGR YWASIGPQQT 600
  601 LYIPSEFLHK GENLIMFYEF EGATTACTAT ACTAKFTNIP VFDY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
hydrolase activity, hydrolyzing O-glycosyl compounds	6.26329339735894	bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds	5.92180849080637	bayes_pls_golite062009
hydrolase activity	3.98075336331567	bayes_pls_golite062009
hexosaminidase activity	3.21852337137039	bayes_pls_golite062009
beta-N-acetylhexosaminidase activity	2.69072465526737	bayes_pls_golite062009
catalytic activity	1.85569074294201	bayes_pls_golite062009
glucosidase activity	1.85545420386612	bayes_pls_golite062009
galactosidase activity	1.26155841119987	bayes_pls_golite062009
sugar binding	1.05517664149942	bayes_pls_golite062009
alpha-glucosidase activity	1.00973231642658	bayes_pls_golite062009
beta-glucuronidase activity	0.55376725638834	bayes_pls_golite062009
mannosidase activity	0.48536369022293	bayes_pls_golite062009
carbohydrate binding	0.36193860645628	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	0.266938437560648	bayes_pls_golite062009
binding	0.129334455670168	bayes_pls_golite062009
beta-galactosidase activity	0.0137149865738109	bayes_pls_golite062009

Term	Confidence	Notes
sugar binding	1.88707446766738	bayes_pls_golite062009
monosaccharide binding	1.5016957206605	bayes_pls_golite062009
hydrolase activity	1.33447645932315	bayes_pls_golite062009
binding	1.18625504714684	bayes_pls_golite062009
carbohydrate binding	1.13274900486168	bayes_pls_golite062009
peptidase activity	0.619147192549203	bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides	0.338739134947705	bayes_pls_golite062009
fucose binding	0.25045987594275	bayes_pls_golite062009
protein binding	0.0768945417872265	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..487]	PSI-BLAST	49.522879	Native structure of beta-galactosidase from Penicillium sp.
2	View Details	[488..644]	FFAS03	1.1	beta-Glucuronidase; beta-Glucuronidase, domain 3

Protein Overview: CE29416

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: