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Protein Overview: ser-4

General Information:
Name(s) found: ser-4 / CE29370 [WormBase]
Description(s) found:
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  • WBGene00004779 locus:ser-4 status:Confirmed UniProt:G5EGH0 protein_id:CCD73768.1 [WormBase]
  • pir||T42203 serotonin receptor 5-HT precursor - Caenorhabditis elegans [NCBI NR]
  • gi|2317845|gb|AAB66360.1| serotonin receptor precursor [Caenorhabditis elegans] [NCBI NR]
  • gi|17555606|ref|NP_497452.1| SERotonin/octopamine receptor family member (ser-4) [Caenorhabditis elegans] [NCBI NR]
  • gi|15617878|gb|AAK29875.2| Serotonin/octopamine receptor family protein 4, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE29370 WBGene00004779 locus:ser-4 status:Confirmed TR:O18512 protein_id:AAK29875.2 [wormpep150.fasta]
  • 29370 WBGene00004779 locus:ser-4 status:Confirmed TR:O18512 protein_id:AAK29875.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • SERotonin/octopamine receptor subunit, serotonin receptor precursor, 5-hydroxytryptamine receptor, G-protein coupled (50.1 kD) (ser-4) [Caenorhabditis elegans]gi|15617878|gb|AAK29875.2| Serotonin/octopamine receptor family protein 4 [Caenorhabditis elega [nrdb_11152004_Chlamydomonas]
  • locus:ser-4 status:Confirmed TR:O18512 protein_id:AAK29875.2 [wormpep115.fasta.reversed]
  • CE29370 status:Confirmed TR:O18512 protein_id:AAK29875.2 [wormpep80.hongbin]
  • CE29370 WBGene00004779 locus:ser-4 status:Confirmed UniProt:O18512_CAEEL protein_id:AAK29875.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29370 WBGene00004779 locus:ser-4 status:Confirmed UniProt:O18512_CAEEL protein_id:AAK29875.2| [wormORF-contam.fasta]
  • Serotonin/octopamine receptor family protein 4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • SERotonin/octopamine receptor family member (ser-4) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • serotonin receptor precursor [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29370 WBGene00004779 locus:ser-4 status:Confirmed UniProt:O18512 protein_id:AAK29875.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29370 WBGene00004779 locus:ser-4 status:Confirmed UniProt:G5EGH0 protein_id:CCD73768.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • SERotonin/octopamine receptor family OS=Caenorhabditis elegans GN=ser-4 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 445 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    serotonin receptor signaling pathway [ISSLink to PubMed article]
    Molecular Function: rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDETLLNLT ASPSSQPATL LSAVARGTHL VDQFPAHAEI FSDIERPLVQ TVILASVLLV  60
   61 LILSCFIGNL FVILAIIMER DLRGRPQYYL IFSLAVADLL VGMIVTPLGA WFTVTGTWNL 120
  121 GVVVCDFWIS VDVLVCTASI LHLVAIALDR YWSITDICYV QNRTPKRITL MLAVIWFTSL 180
  181 LISLAPFAGW KDEGFSDRVL KSHVCLISQQ ISYQVFSTAT AFYIPLIAII CVYWKIMRAA 240
  241 KKRFKRERDR RTVIRPPPDA IDEKKAMMPK KSKKCPLPPA VVISDIQANG GTGGKTNSIK 300
  301 NPPRHNESSS SASEEERTMT QTNHAPGDVT TQETKIDEEN GRSKPGIVKR RRRTKESNEM 360
  361 KRERKAWRTL AIITGTFVAC WTPFFLVSIY RPICGCQISP VLEQVTLWLG YLNSALNPII 420
  421 YTVFSQDFRA AFKRIIKRMC LIHDY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 32.0 Rhodopsin
    2 View Details [342..445] FFAS03 5.29 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle