| Protein: | ser-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 445 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ser-4.
| Description | E-value | Query Range |
Subject Range |
|
|
268.0 | [0..28] | [370..1] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MIDETLLNLT ASPSSQPATL LSAVARGTHL VDQFPAHAEI FSDIERPLVQ TVILASVLLV 60
61 LILSCFIGNL FVILAIIMER DLRGRPQYYL IFSLAVADLL VGMIVTPLGA WFTVTGTWNL 120
121 GVVVCDFWIS VDVLVCTASI LHLVAIALDR YWSITDICYV QNRTPKRITL MLAVIWFTSL 180
181 LISLAPFAGW KDEGFSDRVL KSHVCLISQQ ISYQVFSTAT AFYIPLIAII CVYWKIMRAA 240
241 KKRFKRERDR RTVIRPPPDA IDEKKAMMPK KSKKCPLPPA VVISDIQANG GTGGKTNSIK 300
301 NPPRHNESSS SASEEERTMT QTNHAPGDVT TQETKIDEEN G
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [342-445] |
1 11 21 31 41 51
| | | | | |
1 RSKPGIVKRR RRTKESNEMK RERKAWRTLA IITGTFVACW TPFFLVSIYR PICGCQISPV 60
61 LEQVTLWLGY LNSALNPIIY TVFSQDFRAA FKRIIKRMCL IHDY
|
| Detection Method: | |
| Confidence: | 5.29 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
