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Protein Overview: CE29022

General Information:
Name(s) found: CE29022 [WormBase]
Description(s) found:
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  • WBGene00015467 locus:basl-1 status:Partially_confirmed UniProt:O45138 protein_id:CCD63121.1 [WormBase]
  • gi|17551992|ref|NP_498210.1| hypothetical protein C05D2.3 [Caenorhabditis elegans] [NCBI NR]
  • gi|15488563|gb|AAC02720.2| Hypothetical protein C05D2.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE29022 WBGene00015467 aromatic-L-amino-acid decarboxylase status:Partially_confirmed TR:O45138 protein_id:AAC02720.2 [wormpep150.fasta]
  • 29022 WBGene00015467 aromatic-L-amino-acid decarboxylase status:Partially_confirmed TR:O45138 protein_id:AAC02720.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • dopa decarboxylase family member (3G707) [Caenorhabditis elegans]gi|15488563|gb|AAC02720.2| Hypothetical protein C05D2.3 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • aromatic-L-amino-acid decarboxylase status:Partially_confirmed TR:O45138 protein_id:AAC02720.2 [wormpep115.fasta.reversed]
  • CE29022 aromatic-L-amino-acid decarboxylase status:Partially_confirmed TR:O45138 protein_id:AAC02720.2 [wormpep80.hongbin]
  • CE29022 WBGene00015467 aromatic-L-amino-acid decarboxylase status:Partially_confirmed UniProt:O45138_CAEEL protein_id:AAC02720.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29022 WBGene00015467 aromatic-L-amino-acid decarboxylase status:Partially_confirmed UniProt:O45138_CAEEL protein_id:AAC02720.2| [wormORF-contam.fasta]
  • Hypothetical protein C05D2.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C05D2.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29022 WBGene00015467 aromatic-L-amino-acid decarboxylase status:Partially_confirmed UniProt:O45138 protein_id:AAC02720.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29022 WBGene00015467 locus:basl-1 aromatic-L-amino-acid decarboxylase status:Partially_confirmed UniProt:O45138 protein_id:CCD63121.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29022 WBGene00015467 locus:basl-1 status:Partially_confirmed UniProt:O45138 protein_id:CCD63121.1 [wormpep246-ecoli-contam.fasta]
  • BAS-Like OS=Caenorhabditis elegans GN=basl-1 PE=3 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 509 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carboxylic acid metabolic process [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    carboxy-lyase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAKLRVEG KKMIEIVANY WDGIRTRKPI PDVKPGYIEK SVPSNPPTTP ESWEKVFGDL  60
   61 EKVIFNGSSH WNHPHFFAYF SAGIGYHSIL ADIISSGLGS VGFTWIACPP ITELEKITLD 120
  121 WLVDLTSLPV EFKNSHPGHG CGIIQSSASD STLIAIMTAR AAKVEFIKQN PSTFQWLINS 180
  181 TSEHLRSISY WTPVNRTIHD STDIITPYYH DPRVFKNFVM YFTDQAHSSV EKGAMLAGVR 240
  241 FRKLRSVRGY MENYEMDSKI LIDAIEQDRS RGFIPFMVAL TVGTTATCAA DDVEKIGQIC 300
  301 QKEGLYLHGA FAFCDEFKYL VNGLKYVDSY NTDLHKAGMI NFDCCPLWFK NGTYASRYYN 360
  361 VDPVYLAHEY QSSNMDYRHL EVPLGRRFRS LKVWFTMRNM GVEKIREYQR KTVSLALLFT 420
  421 KIIVEGDKFE LFTPPHLGMA TFRLKNHTNS DNERLLQAIN RDRRIHLGIS MVHGVYVLRF 480
  481 CVGSPLTNEE DVHFTKSVIF EIAHFLFEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..509] PSI-BLAST 106.0 DOPA decarboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  2.16315837695677 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  2.16315837695677 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
    		•  1.01853440922526 bayes_pls_golite062009
  • transferase activity
    		•  0.737426388870721 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • cystathionine gamma-lyase activity
    		•  0.505859361763689 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.27933426619091 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.271623203801431 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  0.234399054481664 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.130698724135981 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.11598778799668 bayes_pls_golite062009
  • aromatic-L-amino-acid decarboxylase activity
    		•  0.10589462882093 bayes_pls_golite062009
  • binding
    		•  0.0138724523355769 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle