YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE28686

General Information:
Name(s) found: CE28686 [WormBase]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • WBGene00020646 status:Confirmed UniProt:G5ECC4 protein_id:CCD61839.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSILLFILI FLIFAISEAQ ENIDKNLDFI KPIGFGSREK RYVIRAKRWK KHTLTWQLQT  60
   61 QNLLDPDVFI VRNTMHRAFN EWSTVSSVDF REIPPDLVTK QPPDIYIAFE KGEHSDGFPF 120
  121 DGQDGVVAHA FYPRDGRLHF DAEEQWSLNS VEGVNLFQTA VHEIGHLLGL EHSMDVRAAM 180
  181 FAAKRPYDPA FTLGDDDVRA IRSLFPINET DANSGSEENS EDPVTTVKPI SKEEGIDEEN 240
  241 NDPFDASSTT TSSSSPDSFF PFPLPSIEHF QRRNDWFVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 62.69897 X-ray structure of human proMMP-1: New insights into collagenase action

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.361128926739778 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29183147920977 bayes_pls_golite062009
  • peptidase activity
    		•  0.23695590197447 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.0341081586881899 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle