YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE28472

General Information:
Name(s) found: CE28472 [WormBase]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • WBGene00019008 status:Partially_confirmed UniProt:Q95R04 protein_id:AAK73885.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridoxine biosynthetic process [IEALink to PubMed article]
    D-ribose metabolic process [IEALink to PubMed article]
    thiamin biosynthetic process [IEALink to PubMed article]
    Molecular Function: ribokinase activity [IEALink to PubMed article]
    pyridoxal kinase activity [IEALink to PubMed article]
    phosphomethylpyrimidine kinase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRALFSSI LFSFKTYFSK KIDSVFQMSS SELIAELERE RDRRVLSIQS HVVHGYAGNK  60
   61 CSVFPLQLHG FEVDFINSVQ FSNHAGYEHV KGQKLTEKEL EELYEGLTLN NINNYTHVLT 120
  121 GYCGNVTFLQ KIADVVKDLK KKNGNTTFVC DPVMGDNGRY YTPKELMPVY RDLIIPLADV 180
  181 LTPNAFELGE LTGSPIETEE DCLRAVNELH AKGVKTVVVT SGVTGAQTNE SLRCYASVKG 240
  241 SHVYRFTFPR LVGQFVGTGD TFTSLLVVWL DELNGDVSEA VKRVLASMQC LIRKTSSYAQ 300
  301 LQVDTNSRAM CELRLIQSRK DLLWPPTCDQ IQVEKIGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] PSI-BLAST 54.154902 Pyridoxal kinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • kinase activity
    		•  3.96411195020495 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  3.67035256855428 bayes_pls_golite062009
  • transferase activity
    		•  3.30865420017814 bayes_pls_golite062009
  • lithium ion binding
    		•  3.00550221878163 bayes_pls_golite062009
  • sodium ion binding
    		•  2.93046843966773 bayes_pls_golite062009
  • pyridoxal kinase activity
    		•  2.62798458074822 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.56927916030784 bayes_pls_golite062009
  • phosphomethylpyrimidine kinase activity
    		•  2.12104666683074 bayes_pls_golite062009
  • pyridoxal binding
    		•  2.04719269680858 bayes_pls_golite062009
  • catalytic activity
    		•  1.74474587246986 bayes_pls_golite062009
  • binding
    		•  1.4216897826135 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  1.32862180479506 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.23363144435362 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.21529398967164 bayes_pls_golite062009
  • potassium ion binding
    		•  1.18018952731159 bayes_pls_golite062009
  • alkali metal ion binding
    		•  1.18018952731159 bayes_pls_golite062009
  • DNA binding
    		•  0.954497955488766 bayes_pls_golite062009
  • transcription factor activity
    		•  0.376784274163604 bayes_pls_golite062009
  • protein binding
    		•  0.117280046908929 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle