YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE28472
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRALFSSI LFSFKTYFSK KIDSVFQMSS SELIAELERE RDRRVLSIQS HVVHGYAGNK  60
   61 CSVFPLQLHG FEVDFINSVQ FSNHAGYEHV KGQKLTEKEL EELYEGLTLN NINNYTHVLT 120
  121 GYCGNVTFLQ KIADVVKDLK KKNGNTTFVC DPVMGDNGRY YTPKELMPVY RDLIIPLADV 180
  181 LTPNAFELGE LTGSPIETEE DCLRAVNELH AKGVKTVVVT SGVTGAQTNE SLRCYASVKG 240
  241 SHVYRFTFPR LVGQFVGTGD TFTSLLVVWL DELNGDVSEA VKRVLASMQC LIRKTSSYAQ 300
  301 LQVDTNSRAM CELRLIQSRK DLLWPPTCDQ IQVEKIGQ

Type	Start	End	Confidence
Signal Peptide	1	19	0.51
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	338	0.99