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Protein Overview: mspn-1

General Information:
Name(s) found: mspn-1 / CE28240 [WormBase]
Description(s) found:
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  • WBGene00010557 locus:mspn-1 Mitochondrial sorting homolog status:Confirmed UniProt:P54815 protein_id:CAA93516.2 [WormBase]
  • gi|21903441|sp|P54815.2|MSP1_CAEEL RecName: Full=Protein MSP1 homolog [NCBI NR]
  • gi|17541224|ref|NP_501860.1| Mitochondrial Sorting of Proteins (yeast MSP) in Nematode family member (mspn-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|14530490|emb|CAA93516.2| C. elegans protein K04D7.2a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Mitochondrial sorting homolog OS=Caenorhabditis elegans GN=mspn-1 PE=3 SV=2 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE28240 WBGene00010557 TAT binding homolog 4 like status:Partially_confirmed SW:P54815 protein_id:CAA93516.2 [wormpep150.fasta]
  • 28240 WBGene00010557 TAT binding homolog 4 like status:Partially_confirmed SW:P54815 protein_id:CAA93516.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • no mitochondrial derivative (37.7 kD) (4K943) [Caenorhabditis elegans]gi|14530490|emb|CAA93516.2| Hypothetical protein K04D7.2a [Caenorhabditis elegans]gi|21903441|sp|P54815|MSP1_CAEEL MSP1 protein homolog [nrdb_11152004_Chlamydomonas]
  • TAT binding homolog 4 like status:Partially_confirmed SW:P54815 protein_id:CAA93516.2 [wormpep115.fasta.reversed]
  • CE28240 TAT binding homolog 4 like status:Partially_confirmed SW:P54815 protein_id:CAA93516.2 [wormpep80.hongbin]
  • CE28240 WBGene00010557 TAT binding homolog 4 like status:Partially_confirmed UniProt:P54815 protein_id:CAA93516.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE28240 WBGene00010557 TAT binding homolog 4 like status:Partially_confirmed UniProt:P54815 protein_id:CAA93516.2| [wormORF-contam.fasta]
  • Hypothetical protein K04D7.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Protein MSP1 homolog [nr-271106-contam.fasta]
  • K04D7.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE28240 WBGene00010557 locus:mspn-1 TAT binding homolog 4 like status:Partially_confirmed UniProt:P54815 protein_id:CAA93516.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE28240 WBGene00010557 locus:mspn-1 TAT binding homolog 4 like status:Confirmed UniProt:P54815 protein_id:CAA93516.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE28240 WBGene00010557 locus:mspn-1 status:Confirmed UniProt:P54815 protein_id:CAA93516.2 Mitochondrial sorting homolog [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 342 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    protein catabolic process [IEALink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATPase activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    kinase activity [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDRNELIGV AIRVVAAAAV SFLSVRYLVK YLDPNYSVNE ESKKKVAQLF HELGIDRQIE  60
   61 LSEHEIRIAT QFVGGEDVGA DWDEIGGCEE LVAELKDRII LPLRFASQSG SHLLSPPRGI 120
  121 LLYGPPGCGK TLLAKAVARA AGCRFINLQV SNLTDKWYGE SQKLAAAVFS VAQKFQPTII 180
  181 FIDEIDSFLR DRQSHDHEST AMMKAQFMTL WDGFSSSGDQ IIVMGATNRP RDVDAAILRR 240
  241 MTARFQVPVP NAKQRSQILN VILRNEKINN TVNLGEIAQA AEGLSGSDLK EVCRLALLAR 300
  301 AKATVASGGS VNQLLPLEQS DFESAVHKYM RAAHLLVEET LD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..342] PSI-BLAST 78.69897 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.48

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle