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Protein Overview: mex-1

General Information:
Name(s) found: mex-1 / CE28097 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003228 locus:mex-1 status:Confirmed UniProt:G5ECB9 protein_id:CAA91362.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 494 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    P granule [IDALink to PubMed article]
    Biological Process: morphogenesis of an epithelium [IMPLink to PubMed article]
    embryonic pattern specification [IGILink to PubMed article][IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    formation of primary germ layer [IMPLink to PubMed article]
    establishment of cell polarity [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    cell fate specification [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    molecular_function [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSSNGEHHQ QKQTPYFMNA PCDPALLALA QQTFLGFQPQ KNMYQHGFPP MLPHRNLIPS  60
   61 LAAAIPEMDK LMLEEPIEAG SMPYRRATNK NISVSDDSFN NMHRSSSSSQ YRRHSAQWET 120
  121 MTDDERESVQ RQKRKEEAFK TALCDAFKRS GSCPYGEACR FAHGENELRM PSQPRGKAHP 180
  181 KYKTQLCDKF SNFGQCPYGP RCQFIHKLKK GLPLSEYNRA LQEGEISPAR DDEITNPDES 240
  241 SSQVEDLSEL HHRQHQQQQQ YQQRYRRPPF NNFHDMSDSG YSAPRRRLHH QFEHLGSEQQ 300
  301 QQQQQQTPAP KIVYPSMQVV NIEMATGDGP KRSDNHHYHH HHHQRRHIPA PPSTGPLSSL 360
  361 IDQADYEASM ASGKMFGKPE NIRTYGAMIR ANEEHVERNQ TGVVKKERAT VLPKRDLSLI 420
  421 REEDTLLVDG SHLNMTSSAI LPAHQIPSTT TTSTSSPVQE QPWYEKIFGK MTMIQEESSM 480
  481 GGEDDDAHED HYSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] deduced N/A No confident structure predictions are available.
    2 View Details [140..227] PSI-BLAST 20.69897 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d
    3 View Details [228..348] deduced N/A No confident structure predictions are available.
    4 View Details [349..494] MSA 3.137994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle