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Protein Overview: col-114

General Information:
Name(s) found: col-114 / CE27897 [WormBase]
Description(s) found:
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  • WBGene00000688 locus:col-114 status:Partially_confirmed UniProt:Q18975 protein_id:CCD63361.1 [WormBase]
  • gi|17539522|ref|NP_501150.1| COLlagen family member (col-114) [Caenorhabditis elegans] [NCBI NR]
  • gi|14574015|gb|AAA82291.2| Collagen protein 114 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27897 WBGene00000688 locus:col-114 cuticle collagen status:Partially_confirmed TR:Q18975 protein_id:AAA82291.2 [wormpep150.fasta]
  • 27897 WBGene00000688 locus:col-114 cuticle collagen status:Partially_confirmed TR:Q18975 protein_id:AAA82291.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • COLlagen structural gene (col-114) [Caenorhabditis elegans]gi|14574015|gb|AAA82291.2| Collagen protein 114 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:col-114 cuticle collagen status:Partially_confirmed TR:Q18975 protein_id:AAA82291.2 [wormpep115.fasta.reversed]
  • CE27897 cuticle collagen status:Partially_confirmed TR:Q18975 protein_id:AAA82291.2 [wormpep80.hongbin]
  • CE27897 WBGene00000688 locus:col-114 cuticle collagen status:Partially_confirmed UniProt:Q18975_CAEEL protein_id:AAA82291.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27897 WBGene00000688 locus:col-114 cuticle collagen status:Partially_confirmed UniProt:Q18975_CAEEL protein_id:AAA82291.2| [wormORF-contam.fasta]
  • Collagen protein 114 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • COLlagen family member (col-114) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27897 WBGene00000688 locus:col-114 cuticle collagen status:Partially_confirmed UniProt:Q18975 protein_id:AAA82291.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27897 WBGene00000688 locus:col-114 cuticle collagen status:Partially_confirmed UniProt:Q18975 protein_id:CCD63361.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE27897 WBGene00000688 locus:col-114 status:Partially_confirmed UniProt:Q18975 protein_id:CCD63361.1 [wormpep246-ecoli-contam.fasta]
  • COLlagen OS=Caenorhabditis elegans GN=col-114 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 321 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDESCQRIK AYQWVANIAM CFAIVSVLTV CVSMPAIYMY MFHVKQLINT EVVSCEDHAR  60
   61 EIWREVEIMK NLPFTNRTSR FPRQAAYKDA APAGGGGGGE KYSEAPPVIE AAGGGSCGGC 120
  121 CPGGPGPNGK PGKPGRPGKP GAPGLPGVPG KTTIQAPCEA ASPPPCRVCP VGMPGEQGVT 180
  181 GAPGDKGPAG QPGRNGPDGP NGEPGPKGPP GQPGADGQPG MPGEPGKDAP QEGSPVPGDP 240
  241 GPPGDSGIPG PPGPPGMAGP DGIPGMGGAK GQNGPDGPPG ASGESGPNGP PGSGGGAGEK 300
  301 GICPKYCAID GGVFFEDGTR R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..321] PSI-BLAST 30.522879 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle