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Protein Overview: vab-2

General Information:
Name(s) found: vab-2 / CE27606 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00006869 locus:vab-2 status:Confirmed UniProt:G5EEE7 protein_id:CCD74044.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    axon [IDALink to PubMed article]
    Biological Process: embryonic development [TASLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    ephrin receptor signaling pathway [IDALink to PubMed article]
    epidermis development [IMPLink to PubMed article]
    Molecular Function: ephrin receptor binding [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPPIKIQTI LLFILTTVHC SAKRLPQIYW NSTNPLVERY AAIGDTLDIV CPFFDENSDE  60
   61 LTEQSIIYRV TEEEYENCER RSKAKELGRC TQPYQEEKLK VAFRLMSPNP SGLDYRPGVT 120
  121 YYFISTSTGS RKGLYNEQGG LCASHNLKMV IHITDRNGDI GPHHHRHHHK KTTTTTTTST 180
  181 STSTPKTIPP VVEMDSSAEK LWEQFYEKVM PIDNTWPEIT RGERVTLYQG NKKDEYEQVP 240
  241 AEVVDFEIHE IGDVESLYSS SGRLRYVLLL PALLLLRIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] PSI-BLAST 61.221849 Ephrin-b2 ectodomain
    2 View Details [198..279] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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