YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	vab-2
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPPIKIQTI LLFILTTVHC SAKRLPQIYW NSTNPLVERY AAIGDTLDIV CPFFDENSDE  60
   61 LTEQSIIYRV TEEEYENCER RSKAKELGRC TQPYQEEKLK VAFRLMSPNP SGLDYRPGVT 120
  121 YYFISTSTGS RKGLYNEQGG LCASHNLKMV IHITDRNGDI GPHHHRHHHK KTTTTTTTST 180
  181 STSTPKTIPP VVEMDSSAEK LWEQFYEKVM PIDNTWPEIT RGERVTLYQG NKKDEYEQVP 240
  241 AEVVDFEIHE IGDVESLYSS SGRLRYVLLL PALLLLRIF

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	279	0.99