| Protein: | vab-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 279 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vab-2.
| Description | E-value | Query Range |
Subject Range |
|
|
277.0 | [0..22] | [266..19] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MHPPIKIQTI LLFILTTVHC SAKRLPQIYW NSTNPLVERY AAIGDTLDIV CPFFDENSDE 60
61 LTEQSIIYRV TEEEYENCER RSKAKELGRC TQPYQEEKLK VAFRLMSPNP SGLDYRPGVT 120
121 YYFISTSTGS RKGLYNEQGG LCASHNLKMV IHITDRNGDI GPHHHRHHHK KTTTTTTTST 180
181 STSTPKTIPP VVEMDSS
|
| Detection Method: |  |
| Confidence: | 61.221849 |
| Match: | 1ikoP |
| Description: | Ephrin-b2 ectodomain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [198-279] |
1 11 21 31 41 51
| | | | | |
1 AEKLWEQFYE KVMPIDNTWP EITRGERVTL YQGNKKDEYE QVPAEVVDFE IHEIGDVESL 60
61 YSSSGRLRYV LLLPALLLLR IF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
