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Protein Overview: cho-1

General Information:
Name(s) found: cho-1 / CE27109 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00000501 locus:cho-1 High-affinity choline transporter 1 status:Confirmed UniProt:O02228 protein_id:CAB02847.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 576 amino acids

    Gene Ontology:
    Cellular Component: Gram-negative-bacterium-type cell wall [IEALink to PubMed article]
    membrane [ICLink to PubMed article][IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    choline transport [ISSLink to PubMed article]
    proline transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    pantothenate transmembrane transport [IEALink to PubMed article]
    Molecular Function: pantothenate transporter activity [IEALink to PubMed article]
    choline transmembrane transporter activity [ISSLink to PubMed article]
    proline:sodium symporter activity [IEALink to PubMed article]
    sodium ion transmembrane transporter activity [IEALink to PubMed article]
    sodium ion binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLLGIVAI VFFYVLILVV GIWAGRKSKS SKELESEAGA ATEEVMLAGR NIGTLVGIFT  60
   61 MTATWVGGAY INGTAEALYN GGLLGCQAPV GYAISLVMGG LLFAKKMREE GYITMLDPFQ 120
  121 HKYGQRIGGL MYVPALLGET FWTAAILSAL GATLSVILGI DMNASVTLSA CIAVFYTFTG 180
  181 GYYAVAYTDV VQLFCIFVGL WVCVPAAMVH DGAKDISRNA GDWIGEIGGF KETSLWIDCM 240
  241 LLLVFGGIPW QVYFQRVLSS KTAHGAQTLS FVAGVGCILM AIPPALIGAI ARNTDWRMTD 300
  301 YSPWNNGTKV ESIPPDKRNM VVPLVFQYLT PRWVAFIGLG AVSAAVMSSA DSSVLSAASM 360
  361 FAHNIWKLTI RPHASEKEVI IVMRIAIICV GIMATIMALT IQSIYGLWYL CADLVYVILF 420
  421 PQLLCVVYMP RSNTYGSLAG YAVGLVLRLI GGEPLVSLPA FFHYPMYTDG VQYFPFRTTA 480
  481 MLSSMATIYI VSIQSEKLFK SGRLSPEWDV MGCVVNIPID HVPLPSDVSF AVSSETLNMK 540
  541 APNGTPAPVH PNQQPSDENT LLHPYSDQSY YSTNSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] MSA 6.956986 View MSA. No confident structure predictions are available.
    2 View Details [228..308] MSA 3.960995 View MSA. No confident structure predictions are available.
    3 View Details [309..503] MSA 3.943988 View MSA. No confident structure predictions are available.
    4 View Details [504..576] FFAS03 1.09 30S subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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